Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2095
         (422 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ...    40   0.001
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    29   3.4  
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    29   3.4  
AF114152-1|AAD12541.1| 2098|Drosophila melanogaster rough deal p...    27   7.8  
AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA...    27   7.8  

>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
            protein.
          Length = 1219

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +1

Query: 16   TLRLVYNAVIRSVLDFGTFFLDPGNVAGFRKLDLIQSRALRIVSGAMKSSPVNALQIECC 195
            TL  V  A I + L++G F       +   K+    + A+R+  GA +S+P+N L  E  
Sbjct: 782  TLLNVAKATIIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGAYRSTPINNLLYESN 841

Query: 196  DPPLNLRRQYLSDRFIFRIVQFHNHPL 276
             PPL ++R     +    ++   N P+
Sbjct: 842  TPPLEMKRDLQIAKLSQNLILSKNTPI 868


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 25  LVYNAVIRSVLDFGTFFLDPGNVAGFRKLDLIQSRALRIVSGA 153
           L+YN+V++ +  +G+      + +    +   QSR LRI++GA
Sbjct: 784 LLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 25  LVYNAVIRSVLDFGTFFLDPGNVAGFRKLDLIQSRALRIVSGA 153
           L+YN+V++ +  +G+      + +    +   QSR LRI++GA
Sbjct: 784 LLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826


>AF114152-1|AAD12541.1| 2098|Drosophila melanogaster rough deal
            protein protein.
          Length = 2098

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 185  ICRALTGLDFMAPETILKALDCMRSSF-LKPATLPGSKKK 69
            ICRAL G+     ET +     +  SF +K  T+P + KK
Sbjct: 1125 ICRALDGISVALGETTINFSCALNGSFDVKTLTVPTTTKK 1164


>AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA
            protein.
          Length = 2089

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 185  ICRALTGLDFMAPETILKALDCMRSSF-LKPATLPGSKKK 69
            ICRAL G+     ET +     +  SF +K  T+P + KK
Sbjct: 1125 ICRALDGISVALGETTINFSCALNGSFDVKTLTVPTTTKK 1164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,711,261
Number of Sequences: 53049
Number of extensions: 333794
Number of successful extensions: 513
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)