Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2094
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   1.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   3.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.9  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    20   8.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   8.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   8.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   8.9  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 109 PLVSPHE*VPPP 74
           P V PH+ VPPP
Sbjct: 12  PTVLPHQEVPPP 23


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +1

Query: 340 VKTI*TALYYFKKRYSLSYNYYTFTSV 420
           V T+  A+YY++++Y   ++ YT + +
Sbjct: 112 VLTLCYAVYYWRQQYEDFWHRYTLSFI 138


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 133 FS*LLVVGPLVSPHE*VPPPHLFLP*SS 50
           F   + +G    P +  PPP+ F P +S
Sbjct: 190 FKRTIALGAFYQPLQPFPPPYPFYPGTS 217


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 167  ASCNKNQTRKIIFVITGCRTSCESARVGTTT 75
            A+C+      ++ ++T  + +  +  V TTT
Sbjct: 1326 ATCDGTSNVNVVDIVTTAKPAQSTTSVSTTT 1356


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 161 CNKNQTRKIIFVITGCRTSCESARVGTTT 75
           C K++T+K + ++   +     +  GTTT
Sbjct: 37  CKKHKTKKPVQILALLQEIIPKSYFGTTT 65


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 161 CNKNQTRKIIFVITGCRTSCESARVGTTT 75
           C K++T+K + ++   +     +  GTTT
Sbjct: 37  CKKHKTKKPVQILALLQEIIPKSYFGTTT 65


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 125 LRKLFCGFDFYYTMLFLH 178
           L  L  GF  Y+T  +LH
Sbjct: 147 LSALLEGFTLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 125 LRKLFCGFDFYYTMLFLH 178
           L  L  GF  Y+T  +LH
Sbjct: 147 LSALLEGFTLYHTTAYLH 164


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 125 LRKLFCGFDFYYTMLFLH 178
           L  L  GF  Y+T  +LH
Sbjct: 147 LSALLEGFTLYHTTAYLH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,939
Number of Sequences: 336
Number of extensions: 2406
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)