Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2093
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease...    29   6.4  
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.               29   6.4  
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea...    29   6.4  
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea...    29   6.4  
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea...    29   6.4  

>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 409 DRFEMILNALNCVNVKFNNYSEFSLSSVKTLFS-SDEKILGC*LNSNWESFKIYVNSLRH 233
           DRF + LN  NC +  F  +S  S S  + LF    E + G   N  + S K +  + RH
Sbjct: 474 DRFSLFLNCTNCASRDFYKWSILSSSGGEMLFDWMGETVTG--RNGAYLSIKAF--AFRH 529

Query: 232 LL 227
            L
Sbjct: 530 FL 531


>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
          Length = 2255

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 409 DRFEMILNALNCVNVKFNNYSEFSLSSVKTLFS-SDEKILGC*LNSNWESFKIYVNSLRH 233
           DRF + LN  NC +  F  +S  S S  + LF    E + G   N  + S K +  + RH
Sbjct: 474 DRFSLFLNCTNCASRDFYKWSILSSSGGEMLFDWMGETVTG--RNGAYLSIKAF--AFRH 529

Query: 232 LL 227
            L
Sbjct: 530 FL 531


>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 409 DRFEMILNALNCVNVKFNNYSEFSLSSVKTLFS-SDEKILGC*LNSNWESFKIYVNSLRH 233
           DRF + LN  NC +  F  +S  S S  + LF    E + G   N  + S K +  + RH
Sbjct: 474 DRFSLFLNCTNCASRDFYKWSILSSSGGEMLFDWMGETVTG--RNGAYLSIKAF--AFRH 529

Query: 232 LL 227
            L
Sbjct: 530 FL 531


>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 409 DRFEMILNALNCVNVKFNNYSEFSLSSVKTLFS-SDEKILGC*LNSNWESFKIYVNSLRH 233
           DRF + LN  NC +  F  +S  S S  + LF    E + G   N  + S K +  + RH
Sbjct: 474 DRFSLFLNCTNCASRDFYKWSILSSSGGEMLFDWMGETVTG--RNGAYLSIKAF--AFRH 529

Query: 232 LL 227
            L
Sbjct: 530 FL 531


>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
           and receptor for egg jelly related protein protein.
          Length = 2253

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 409 DRFEMILNALNCVNVKFNNYSEFSLSSVKTLFS-SDEKILGC*LNSNWESFKIYVNSLRH 233
           DRF + LN  NC +  F  +S  S S  + LF    E + G   N  + S K +  + RH
Sbjct: 474 DRFSLFLNCTNCASRDFYKWSILSSSGGEMLFDWMGETVTG--RNGAYLSIKAF--AFRH 529

Query: 232 LL 227
            L
Sbjct: 530 FL 531


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,480,706
Number of Sequences: 237096
Number of extensions: 737365
Number of successful extensions: 4934
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4934
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)