Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2091
         (391 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01R83 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ...    33   2.0  
UniRef50_Q4U8D4 Cluster: Theileria-specific sub-telomeric protei...    31   6.0  
UniRef50_Q8YWU4 Cluster: Alr1500 protein; n=1; Nostoc sp. PCC 71...    31   7.9  

>UniRef50_Q01R83 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
           domain protein precursor; n=1; Solibacter usitatus
           Ellin6076|Rep: 4Fe-4S ferredoxin, iron-sulfur binding
           domain protein precursor - Solibacter usitatus (strain
           Ellin6076)
          Length = 317

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 59  SLNISTRNLVDYYQSRQSDFWKIIGKSERRIID 157
           SLN ST+N++  Y+SR SD W  + +     +D
Sbjct: 92  SLNASTKNIIKLYKSRTSDEWSFVKQQCMHCVD 124


>UniRef50_Q4U8D4 Cluster: Theileria-specific sub-telomeric protein,
           SVSP family member, putative; n=2; Theileria
           annulata|Rep: Theileria-specific sub-telomeric protein,
           SVSP family member, putative - Theileria annulata
          Length = 732

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
 Frame = -1

Query: 334 NMCIWQKNVID-----MSIQIDFNIIVSFKEYGSKPALNKGK 224
           NM +W+K   D     ++I ++ N++V FK+Y SK  L +G+
Sbjct: 679 NMLVWEKTNYDNYPIALTINVNLNVVVIFKQY-SKTFLKRGR 719


>UniRef50_Q8YWU4 Cluster: Alr1500 protein; n=1; Nostoc sp. PCC
           7120|Rep: Alr1500 protein - Anabaena sp. (strain PCC
           7120)
          Length = 375

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 361 LRSSIIKGANMCIWQKNVIDMSIQIDFNIIVSFKEYGSK 245
           LRS ++KGA + +W  N I M +     ++VS   Y S+
Sbjct: 335 LRSILLKGAGLEVWGLNAIAMIVFATVTVLVSANRYRSQ 373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,025,231
Number of Sequences: 1657284
Number of extensions: 5906083
Number of successful extensions: 12571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12571
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)