Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2091
         (391 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.27 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   7.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   7.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   10.0 

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.0 bits (52), Expect = 0.27
 Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 129 LVNQKDELLTLYSIGSHKTLRNHILD-K*QVNYLPLFNAGFEPYSL 263
           ++ +   +   Y   +H +  NH+ + +  +NY+P  + GF PY +
Sbjct: 300 VMRELGRIFRAYCRENHASWVNHLSNIEDCLNYVPHISTGFSPYEI 345


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 153 LTLYSIGSHKTLRNHILDK*QVNYLP 230
           L  Y    +KT++ HI     ++YLP
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSYLP 40


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 153 LTLYSIGSHKTLRNHILDK*QVNYLP 230
           L  Y    +KT++ HI     ++YLP
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSYLP 40


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 53  FCSLNISTRNLVDYYQSRQ 109
           F  LN    NL++Y+Q  +
Sbjct: 468 FVILNKQINNLIEYFQKNK 486


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 53  FCSLNISTRNLVDYYQSRQ 109
           F  LN    NL++Y+Q  +
Sbjct: 193 FVILNKQINNLIEYFQKNK 211


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 55  KYVIEVATADVLSFFYCL 2
           K V+ +    VLSFF CL
Sbjct: 286 KQVVLMLGTVVLSFFLCL 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,243
Number of Sequences: 336
Number of extensions: 1646
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)