Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2091
         (391 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical ...    27   3.6  
AF016443-2|AAC24272.1|  359|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical ...    26   8.2  

>AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical
           protein C17E7.7 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 262 KEYGSKPALNKGK*LTCYLSKMWFRRVL*LPMEY 161
           K++GS+P     + LTC   KM+FRRV+   +EY
Sbjct: 60  KDFGSQPK----QVLTCDACKMFFRRVVTEKLEY 89


>AF016443-2|AAC24272.1|  359|Caenorhabditis elegans Hypothetical
           protein C17E7.6 protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 220 LTCYLSKMWFRRVL*LPMEYK 158
           LTC   KM+FRR++ L  +YK
Sbjct: 41  LTCDACKMFFRRIVILKKDYK 61


>AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical
           protein C17E7.5 protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 220 LTCYLSKMWFRRVL*LPMEYK 158
           LTC   KM++RR++ L  EYK
Sbjct: 54  LTCDACKMFYRRIVILNREYK 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,401,457
Number of Sequences: 27780
Number of extensions: 151393
Number of successful extensions: 350
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)