Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2090
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 29 2.1
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 27 4.9
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 27 4.9
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 27 4.9
03_04_0018 - 16484109-16484300,16484575-16484656,16484746-164848... 27 4.9
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 27 6.4
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 27 6.4
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 27 6.4
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 27 6.4
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 27 6.4
08_01_0536 + 4652136-4652506,4652592-4652843,4652924-4653034,465... 27 6.4
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 27 6.4
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 27 6.4
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 27 6.4
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 27 6.4
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 27 6.4
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 27 6.4
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 27 6.4
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 27 6.4
08_02_0182 - 13930436-13931245,13931348-13931627,13931788-139323... 27 8.5
07_03_1460 - 26687630-26688310 27 8.5
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+VH+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELVHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPKTYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 606 RKELAHILSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 665
Query: 187 MKKQQK 170
MK +K
Sbjct: 666 MKASRK 671
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 611 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPKTYEYGKPFLPTYLMNKLPWEMRVMHEWY 670
Query: 187 MKKQQK 170
MK +K
Sbjct: 671 MKASRK 676
>03_04_0018 -
16484109-16484300,16484575-16484656,16484746-16484856,
16484937-16485188,16485274-16485677,16486035-16486952,
16486990-16487475,16487566-16487763
Length = 880
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 556 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMKVMHEWY 615
Query: 187 MKKQQK 170
MK +K
Sbjct: 616 MKASRK 621
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 529 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 588
Query: 187 MKKQQK 170
MK +K
Sbjct: 589 MKASRK 594
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 652 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 711
Query: 187 MKKQQK 170
MK +K
Sbjct: 712 MKASRK 717
>08_01_0536 +
4652136-4652506,4652592-4652843,4652924-4653034,
4653124-4653205,4653480-4653671
Length = 335
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 11 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 70
Query: 187 MKKQQK 170
MK +K
Sbjct: 71 MKASRK 76
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 611 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 670
Query: 187 MKKQQK 170
MK +K
Sbjct: 671 MKASRK 676
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 666 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYDKPFLPTYLMNKLPWEMRVMHEWY 725
Query: 187 MKKQQK 170
MK +K
Sbjct: 726 MKASRK 731
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 361 RGEIVHLFTQKRTKYIAKAE--QKWCTL*IGLTFFLSKYEIPTFIKTKIRT*RVVANDFK 188
R E+ H+ + + +A + Q W + + T+ K +PT++ K+ V +++
Sbjct: 698 RKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPTYLMNKLPWEMRVMHEWY 757
Query: 187 MKKQQK 170
MK +K
Sbjct: 758 MKASRK 763
>08_02_0182 -
13930436-13931245,13931348-13931627,13931788-13932324,
13932482-13932579,13932678-13933118
Length = 721
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 4 LSFSPRRLYISYLARSTVP-TRHLWAGWWYLTT 99
+ PR +++ LA + V T H WW LTT
Sbjct: 502 MKIPPRSMFMVQLAGTVVASTVHFATAWWLLTT 534
>07_03_1460 - 26687630-26688310
Length = 226
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 1 VLSFSPRRLYISYLARSTVPTRHLWAGWWY 90
V+S RRL+ R T W GWW+
Sbjct: 69 VISSCARRLHQHARRRREARTAAAWRGWWF 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,565,302
Number of Sequences: 37544
Number of extensions: 187923
Number of successful extensions: 371
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -