Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2090
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   0.63 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.8  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   7.7  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   7.7  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   7.7  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   7.7  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   7.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   7.7  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   7.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   7.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 82  WWYLTTRAHKASHP 123
           WW+ T  +H+AS P
Sbjct: 29  WWFWTATSHEASAP 42


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 395 SMSLGNHLTLVERGDRSPVYTKKDKIYCQSGTKVVH 288
           S  L  H+  +  G+R    T   K + QSG  V+H
Sbjct: 160 SGKLHRHMR-IHTGERPHKCTVCSKTFIQSGQLVIH 194


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 7   DRSREYKKKDRRYDQ 21


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 58  EQCYGLNKKYKVVVD 14
           E C G+   YK+ +D
Sbjct: 114 ENCSGITSAYKIEID 128


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 353 DRSPVYTKKDKIYCQ 309
           DRS  Y KKD+ Y Q
Sbjct: 256 DRSREYKKKDRRYDQ 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,298
Number of Sequences: 438
Number of extensions: 2363
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)