Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2089
(358 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89928-1|BAA25182.1| 605|Homo sapiens HKL1 protein. 33 0.34
BC047105-1|AAH47105.1| 605|Homo sapiens zinc finger protein 354... 31 1.0
AF116030-1|AAD05335.1| 605|Homo sapiens zinc finger protein EZN... 31 1.0
BC114219-1|AAI14220.1| 355|Homo sapiens wingless-type MMTV inte... 30 2.4
BC112118-1|AAI12119.1| 355|Homo sapiens wingless-type MMTV inte... 30 2.4
BC112116-1|AAI12117.1| 355|Homo sapiens wingless-type MMTV inte... 30 2.4
AY009397-1|AAG38657.1| 355|Homo sapiens WNT3 precursor protein. 30 2.4
AB067628-1|BAB70502.1| 355|Homo sapiens WNT3 protein. 30 2.4
BC112111-1|AAI12112.1| 612|Homo sapiens zinc finger protein 354... 29 3.2
BC104777-1|AAI04778.1| 612|Homo sapiens zinc finger protein 354... 29 3.2
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 29 3.2
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AL445650-3|CAH70620.1| 1546|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AL358858-1|CAH71587.1| 1546|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 3.2
AK057737-1|BAB71556.1| 612|Homo sapiens protein ( Homo sapiens ... 29 3.2
AF091889-1|AAF75819.1| 1546|Homo sapiens Usher syndrome type IIa... 29 3.2
AF055580-1|AAC23748.2| 1546|Homo sapiens Usher syndrome type IIa... 29 3.2
>D89928-1|BAA25182.1| 605|Homo sapiens HKL1 protein.
Length = 605
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 74 QQIHSTHLPFYLHGDEKVKGFIGSIRI*RHSLLHWFKCYINILECVRSLEIHDFR*MH 247
++IH+ P+ + E KGF R+ RH ++H + Y N EC ++L H +H
Sbjct: 401 ERIHTGEKPYRCN--ECGKGFTSISRLNRHRIIHTGEKYYNCNECGKALSSHSTLIIH 456
>BC047105-1|AAH47105.1| 605|Homo sapiens zinc finger protein 354A
protein.
Length = 605
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 74 QQIHSTHLPFYLHGDEKVKGFIGSIRI*RHSLLHWFKCYINILECVRSLEIHDFR*MH 247
++IH+ P+ + E KGF R+ RH ++H + + N EC ++L H +H
Sbjct: 401 ERIHTGEKPYRCN--ECGKGFTSISRLNRHRIIHTGEKFYNCNECGKALSSHSTLIIH 456
>AF116030-1|AAD05335.1| 605|Homo sapiens zinc finger protein EZNF
protein.
Length = 605
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 74 QQIHSTHLPFYLHGDEKVKGFIGSIRI*RHSLLHWFKCYINILECVRSLEIHDFR*MH 247
++IH+ P+ + E KGF R+ RH ++H + + N EC ++L H +H
Sbjct: 401 ERIHTGEKPYRCN--ECGKGFTSISRLNRHRIIHTGEKFYNCNECGKALSSHSTLIIH 456
>BC114219-1|AAI14220.1| 355|Homo sapiens wingless-type MMTV
integration site family, member 3 protein.
Length = 355
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 161 HSLLHWFKCYINILECVRSLEIH 229
H + HW CY++ EC+R ++H
Sbjct: 331 HCIFHWC-CYVSCQECIRIYDVH 352
>BC112118-1|AAI12119.1| 355|Homo sapiens wingless-type MMTV
integration site family, member 3 protein.
Length = 355
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 161 HSLLHWFKCYINILECVRSLEIH 229
H + HW CY++ EC+R ++H
Sbjct: 331 HCIFHWC-CYVSCQECIRIYDVH 352
>BC112116-1|AAI12117.1| 355|Homo sapiens wingless-type MMTV
integration site family, member 3 protein.
Length = 355
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 161 HSLLHWFKCYINILECVRSLEIH 229
H + HW CY++ EC+R ++H
Sbjct: 331 HCIFHWC-CYVSCQECIRIYDVH 352
>AY009397-1|AAG38657.1| 355|Homo sapiens WNT3 precursor protein.
Length = 355
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 161 HSLLHWFKCYINILECVRSLEIH 229
H + HW CY++ EC+R ++H
Sbjct: 331 HCIFHWC-CYVSCQECIRIYDVH 352
>AB067628-1|BAB70502.1| 355|Homo sapiens WNT3 protein.
Length = 355
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 161 HSLLHWFKCYINILECVRSLEIH 229
H + HW CY++ EC+R ++H
Sbjct: 331 HCIFHWC-CYVSCQECIRIYDVH 352
>BC112111-1|AAI12112.1| 612|Homo sapiens zinc finger protein 354B
protein.
Length = 612
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 74 QQIHSTHLPFYLHGDEKVKGFIGSIRI*RHSLLHWFKCYINILECVRSLEIHDFR*MH 247
++IH+ P+ + E KGF R+ RH ++H + N EC ++L H +H
Sbjct: 401 ERIHTGEKPYRCN--ECGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIH 456
>BC104777-1|AAI04778.1| 612|Homo sapiens zinc finger protein 354B
protein.
Length = 612
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 74 QQIHSTHLPFYLHGDEKVKGFIGSIRI*RHSLLHWFKCYINILECVRSLEIHDFR*MH 247
++IH+ P+ + E KGF R+ RH ++H + N EC ++L H +H
Sbjct: 401 ERIHTGEKPYRCN--ECGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIH 456
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform
B protein.
Length = 5202
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL445650-3|CAH70620.1| 1546|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 1546
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL358858-1|CAH71587.1| 1546|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 1546
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AK057737-1|BAB71556.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ25008 fis, clone CBL01032, highly similar to
TRANSCRIPTION FACTOR 17. ).
Length = 612
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 74 QQIHSTHLPFYLHGDEKVKGFIGSIRI*RHSLLHWFKCYINILECVRSLEIHDFR*MH 247
++IH+ P+ + E KGF R+ RH ++H + N EC ++L H +H
Sbjct: 401 ERIHTGEKPYRCN--ECGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIH 456
>AF091889-1|AAF75819.1| 1546|Homo sapiens Usher syndrome type IIa
protein protein.
Length = 1546
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
>AF055580-1|AAC23748.2| 1546|Homo sapiens Usher syndrome type IIa
protein protein.
Length = 1546
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 2 NDEEPMKKSMTIITLT*YK*LNLKQQIHSTHLPFYLHGDEK 124
N +P K MT+ + K ++L Q+H T + F+++G EK
Sbjct: 192 NGLQPPIKVMTLGRILVKKWIHLSVQVHQTKISFFINGVEK 232
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,466,615
Number of Sequences: 237096
Number of extensions: 864069
Number of successful extensions: 1379
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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