Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2087
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023EB2A Cluster: hypothetical protein FG09387.1; ...    35   0.88 
UniRef50_Q9NFW7 Cluster: DNA-binding-protein even skipped; n=1; ...    33   2.7  
UniRef50_A7CV01 Cluster: Putative uncharacterized protein; n=3; ...    33   3.6  
UniRef50_Q54JL0 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_UPI0000F1EF3F Cluster: PREDICTED: hypothetical protein;...    33   4.7  
UniRef50_A1FQ24 Cluster: Putative uncharacterized protein precur...    33   4.7  
UniRef50_Q1E923 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_Q8ZT35 Cluster: Maltose ABC transporter, maltose bindin...    33   4.7  
UniRef50_A6TAS7 Cluster: Putative uncharacterized protein; n=3; ...    32   6.2  
UniRef50_Q9LDW8 Cluster: Putative uncharacterized protein AT4g11...    32   6.2  
UniRef50_Q8RXT5 Cluster: Putative uncharacterized protein At4g11...    32   6.2  
UniRef50_A5BFT3 Cluster: Putative uncharacterized protein; n=1; ...    32   6.2  
UniRef50_Q4QIC0 Cluster: Putative uncharacterized protein; n=3; ...    32   6.2  
UniRef50_Q7S9L8 Cluster: Predicted protein; n=1; Neurospora cras...    32   8.2  

>UniRef50_UPI000023EB2A Cluster: hypothetical protein FG09387.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG09387.1 - Gibberella zeae PH-1
          Length = 841

 Score = 35.1 bits (77), Expect = 0.88
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
 Frame = +1

Query: 235 LLFLPS*QPPTTVKLLSWLR----PPTFLRFL*SRNL---LGITLILSRSALHNGP*ATS 393
           L+FL +        +L W+     P TFL    S  +     +T ++ +S LHN P    
Sbjct: 408 LMFLETNSDQIAQVVLDWIMKKATPETFLDMPSSVPMPESTDLTEMIEQSQLHNMP---- 463

Query: 394 LLAPTSLPTPTSQVGLLEPLPTRHPFVQTVPIR 492
            + P+ LP+P+  +     LPT H  ++  P+R
Sbjct: 464 SVIPSRLPSPSQMLQFASTLPTDHAAIEATPLR 496


>UniRef50_Q9NFW7 Cluster: DNA-binding-protein even skipped; n=1;
           Cupiennius salei|Rep: DNA-binding-protein even skipped -
           Cupiennius salei (Wandering spider)
          Length = 278

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 20/51 (39%), Positives = 22/51 (43%)
 Frame = +3

Query: 306 SSIPLISQPIGYYAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPIGATTY 458
           S  PL     GYYA F   R P  P  Y+A      P  +IA  P  AT Y
Sbjct: 157 SGYPLPPPFAGYYASFAASRYPPTPTPYLA-----APRPHIAPAPAQATAY 202


>UniRef50_A7CV01 Cluster: Putative uncharacterized protein; n=3;
           Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
           protein - Opitutaceae bacterium TAV2
          Length = 494

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +1

Query: 400 APTSLPTPTSQVGLLEPLPTRHP 468
           AP S+ TP  QVG LEPLP R P
Sbjct: 392 APPSMTTPDLQVGGLEPLPLRDP 414


>UniRef50_Q54JL0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 633

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = +3

Query: 303 VSSIPLISQPIGYYAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPIGATTYTTPFR 473
           +   P I  P  Y    I    P+ P S I+ SS + PNT   +  +G  TYTTPFR
Sbjct: 354 LKEFPSIEIPFEYLFDLIPPIKPR-PFS-ISSSSLLNPNTIHLT--VGINTYTTPFR 406


>UniRef50_UPI0000F1EF3F Cluster: PREDICTED: hypothetical protein; n=1;
            Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
            rerio
          Length = 3366

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +3

Query: 273  KTPLLASTSYVSSIPLISQPIG---YYAHFIKKRSPQWPVSYIAPSSYITPNT--YIASG 437
            +TP ++    VS  P+I +PI     Y       +P  PV+ + P + +TPNT     S 
Sbjct: 2940 QTPPVSPPPLVSPPPIIGKPISSVPMYVPATTTSTPVTPVTPVTPVTPVTPNTPSPALSP 2999

Query: 438  PIGATTYTTPFRADRADPHR 497
            P+   T  +P       P+R
Sbjct: 3000 PVVLVTSLSPVGEGTGTPNR 3019


>UniRef50_A1FQ24 Cluster: Putative uncharacterized protein
           precursor; n=1; Pseudomonas putida W619|Rep: Putative
           uncharacterized protein precursor - Pseudomonas putida
           W619
          Length = 340

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 425 VGVGSDVGARSDVAHGPLWRALLDKMSV 342
           +G G+D G + ++   PLWRA LD++SV
Sbjct: 222 LGCGADFGVQIELEVQPLWRAFLDEVSV 249


>UniRef50_Q1E923 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 872

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 295 PPTFLRFL*SRNLLGI-TLILSRSALHNGP*ATSLLAPTSLPTPTSQVGLLEPLPTRHPF 471
           PPT    L SR  + + + I S +       +  + A TS P P+   G  +P+P+ HP 
Sbjct: 195 PPTTPMVLRSRQRMSLESNIFSPAKRDAFTPSNGIFASTSTPAPSQFTGFGQPIPSAHPL 254

Query: 472 VQTV 483
            +T+
Sbjct: 255 SRTI 258


>UniRef50_Q8ZT35 Cluster: Maltose ABC transporter, maltose binding
           protein; n=4; Pyrobaculum|Rep: Maltose ABC transporter,
           maltose binding protein - Pyrobaculum aerophilum
          Length = 424

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 331 LLGITLILSRSALHNGP*ATSLLAPTSLPTPTSQVGLLEPLPTRHPFVQTVPIRI 495
           L+ I + +   +    P  T+  +PTS P+P+  +    P PT  P  Q V IRI
Sbjct: 13  LIIIAVAVGYISTRPSPTPTTSPSPTSTPSPSPTISQTTPTPTTPPPAQKVTIRI 67


>UniRef50_A6TAS7 Cluster: Putative uncharacterized protein; n=3;
           Klebsiella pneumoniae subsp. pneumoniae MGH 78578|Rep:
           Putative uncharacterized protein - Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578
          Length = 460

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 355 SRSALHNGP*ATSLLAPTSLPTPTSQVGLLEPLPTRHPFVQTVPI 489
           S++ +H+G    S   PT +P P S  GL  P P   P V   PI
Sbjct: 234 SQTTVHDGGAGGSTTPPTPIPEPRSVWGLPNPAPASLPPVPGTPI 278


>UniRef50_Q9LDW8 Cluster: Putative uncharacterized protein
           AT4g11560; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein AT4g11560 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 652

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 16/64 (25%), Positives = 35/64 (54%)
 Frame = +2

Query: 173 HSFHQEEVCCTCCVYRSCIILCYFSRRSNHLPR*NSSPGFDLLRFFDSFNLATYWVLRSF 352
           +SFH++EV     ++R C++  YF      LP+  ++PGF + + +D+     + +    
Sbjct: 281 YSFHRDEVPAESVMHR-CVV--YFVPAHKQLPKRKNNPGFIVRKVYDTVEKKLWKLTDKD 337

Query: 353 YQEA 364
           Y+++
Sbjct: 338 YEDS 341


>UniRef50_Q8RXT5 Cluster: Putative uncharacterized protein
           At4g11560; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At4g11560 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 587

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 16/64 (25%), Positives = 35/64 (54%)
 Frame = +2

Query: 173 HSFHQEEVCCTCCVYRSCIILCYFSRRSNHLPR*NSSPGFDLLRFFDSFNLATYWVLRSF 352
           +SFH++EV     ++R C++  YF      LP+  ++PGF + + +D+     + +    
Sbjct: 195 YSFHRDEVPAESVMHR-CVV--YFVPAHKQLPKRKNNPGFIVRKVYDTVEKKLWKLTDKD 251

Query: 353 YQEA 364
           Y+++
Sbjct: 252 YEDS 255


>UniRef50_A5BFT3 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1455

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 352 LSRSALHNGP*ATS-LLAPTSLPTPTSQVGLLEPLPTRHPFVQTVP 486
           +S S  H  P A+  +L+PT LPTPTS +    P+      V T P
Sbjct: 821 VSPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVSTHP 866


>UniRef50_Q4QIC0 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 397

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 22/72 (30%), Positives = 34/72 (47%)
 Frame = +3

Query: 273 KTPLLASTSYVSSIPLISQPIGYYAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPIGAT 452
           + P+   T  +  +PL    + + +   +KRS  WP S  AP+  +TPN    +G +G  
Sbjct: 189 RLPMDYLTVSIGVVPLPDSEMPHGSAAPRKRSRWWPWSLTAPT--VTPNA--ETGVVGEA 244

Query: 453 TYTTPFRADRAD 488
              T  R  RAD
Sbjct: 245 AGDTASRITRAD 256


>UniRef50_Q7S9L8 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 641

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 261 TYHGKTPLLASTSYVSSIPLISQPIGYYAHFIKKRSPQWPVSYIA-PSSYITPNTYI 428
           T   K P L+STS V S P +S+  G + H   +   Q    Y A   S+++P+ YI
Sbjct: 22  TLLAKAPTLSSTSIVRSRPRVSRKDGLHRHRGARSLSQQSHGYRANVDSFVSPDLYI 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,529,763
Number of Sequences: 1657284
Number of extensions: 9208503
Number of successful extensions: 28806
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28727
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)