Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2087
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D21852-1|BAA04878.2|  974|Homo sapiens KIAA0029 protein.               31   2.9  
BC114569-1|AAI14570.1| 1023|Homo sapiens transmembrane protein 1...    31   2.9  
BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1...    31   2.9  
AK023577-1|BAB14613.1|  639|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AK000546-1|BAA91245.1|  774|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AC016742-1|AAY14728.1|  784|Homo sapiens unknown protein.              31   2.9  
L16842-1|AAA20046.1|  480|Homo sapiens ubiquinol-cytochrome c re...    29   6.8  
D26485-1|BAA05495.1|  480|Homo sapiens core I protein protein.         29   6.8  
BC009586-1|AAH09586.1|  480|Homo sapiens ubiquinol-cytochrome c ...    29   6.8  

>D21852-1|BAA04878.2|  974|Homo sapiens KIAA0029 protein.
          Length = 974

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 291 STSYVSSIPLISQPIGYYAHFIKKRSPQWPVSYIAPSSY 407
           +  Y +S   +SQP+     +I++ SPQ P  Y AP  Y
Sbjct: 489 TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHY 527


>BC114569-1|AAI14570.1| 1023|Homo sapiens transmembrane protein
           132A, isoform b protein.
          Length = 1023

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 331 LLGITLILSRSALHNGP*ATSLLAPTSLPTPTSQVGL 441
           ++GI+L LSR   H G    +  A ++LP P  +V L
Sbjct: 644 VMGISLTLSRGTAHPGEVTATCWAQSALPAPKQEVAL 680


>BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1
           protein.
          Length = 1099

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 291 STSYVSSIPLISQPIGYYAHFIKKRSPQWPVSYIAPSSY 407
           +  Y +S   +SQP+     +I++ SPQ P  Y AP  Y
Sbjct: 614 TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHY 652


>AK023577-1|BAB14613.1|  639|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13515 fis, clone PLACE1005595. ).
          Length = 639

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 331 LLGITLILSRSALHNGP*ATSLLAPTSLPTPTSQVGL 441
           ++GI+L LSR   H G    +  A ++LP P  +V L
Sbjct: 260 VMGISLTLSRGTAHPGEVTATCWAQSALPAPKQEVAL 296


>AK000546-1|BAA91245.1|  774|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20539 fis, clone KAT11311. ).
          Length = 774

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 331 LLGITLILSRSALHNGP*ATSLLAPTSLPTPTSQVGL 441
           ++GI+L LSR   H G    +  A ++LP P  +V L
Sbjct: 395 VMGISLTLSRGTAHPGEVTATCWAQSALPAPKQEVAL 431


>AC016742-1|AAY14728.1|  784|Homo sapiens unknown protein.
          Length = 784

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 291 STSYVSSIPLISQPIGYYAHFIKKRSPQWPVSYIAPSSY 407
           +  Y +S   +SQP+     +I++ SPQ P  Y AP  Y
Sbjct: 614 TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHY 652


>L16842-1|AAA20046.1|  480|Homo sapiens ubiquinol-cytochrome c
           reductase core I protein protein.
          Length = 480

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 467 GCRVGSG-SNRPTCDVGVGSDVGAR 396
           G RV S  S++PTC VGV  DVG+R
Sbjct: 56  GLRVASEQSSQPTCTVGVWIDVGSR 80


>D26485-1|BAA05495.1|  480|Homo sapiens core I protein protein.
          Length = 480

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 467 GCRVGSG-SNRPTCDVGVGSDVGAR 396
           G RV S  S++PTC VGV  DVG+R
Sbjct: 56  GLRVASEQSSQPTCTVGVWIDVGSR 80


>BC009586-1|AAH09586.1|  480|Homo sapiens ubiquinol-cytochrome c
           reductase core protein I protein.
          Length = 480

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 467 GCRVGSG-SNRPTCDVGVGSDVGAR 396
           G RV S  S++PTC VGV  DVG+R
Sbjct: 56  GLRVASEQSSQPTCTVGVWIDVGSR 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,244,047
Number of Sequences: 237096
Number of extensions: 1500182
Number of successful extensions: 7744
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7742
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)