Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2087
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = +3

Query: 276 TPLLASTSYVSSIPLISQPIGYYAHFIKKRSP-----QWP 380
           TP LAST+  + I +    I ++  F+    P     QWP
Sbjct: 474 TPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNSVQWP 513


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = +3

Query: 276 TPLLASTSYVSSIPLISQPIGYYAHFIKKRSP-----QWP 380
           TP LAST+  + I +    I ++  F+    P     QWP
Sbjct: 474 TPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNSVQWP 513


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 140 LTLGLLYTVWLHSFHQEEVCCT 205
           L   +LY ++L++    EV CT
Sbjct: 681 LARSVLYKIYLNTMESHEVRCT 702


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 390 IAPSSYITPNTYIASGPIGATTYTTPFRADRA 485
           +  +S  +PN  IAS P  +T+ + P +   A
Sbjct: 505 VETNSSPSPNPRIASAPSSSTSSSPPAKGAAA 536


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 271 VKLLSWLRPPTF 306
           V+++SWL+ P+F
Sbjct: 162 VRVVSWLQEPSF 173


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 271 VKLLSWLRPPTF 306
           V+++SWL+ P+F
Sbjct: 162 VRVVSWLQEPSF 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,971
Number of Sequences: 438
Number of extensions: 2377
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)