Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2081
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   5.1  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   8.9  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    22   8.9  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 81  KSSMGNSGHKRLLRLGSSGAG 143
           +  MG+  HKR  RL  S  G
Sbjct: 126 REGMGHDSHKRTHRLSDSDGG 146


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 38  DLNCHTRLHPAS*CQ 82
           DLN HT L P   C+
Sbjct: 96  DLNSHTELKPLDVCE 110


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 163 GSVYPAVALITPTVSE 210
           G++YPA A + PT  E
Sbjct: 71  GNIYPAGAKLAPTEQE 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,365
Number of Sequences: 2352
Number of extensions: 7006
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)