Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2081
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 129 3e-30
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 129 3e-30
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 129 3e-30
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 129 3e-30
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 129 3e-30
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 129 3e-30
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 129 3e-30
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 126 2e-29
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 121 9e-28
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 121 9e-28
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 121 9e-28
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 118 5e-27
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 118 5e-27
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 109 2e-24
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 72 6e-13
U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon prot... 52 8e-07
AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens ... 31 1.3
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 31 1.7
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 31 1.7
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 31 1.7
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 31 1.7
S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subuni... 30 2.9
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 30 2.9
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 30 2.9
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 30 2.9
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 30 2.9
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 30 2.9
EF417879-1|ABN50332.1| 109|Homo sapiens immunoglobulin heavy ch... 29 6.8
EF417878-1|ABN50331.1| 109|Homo sapiens immunoglobulin heavy ch... 29 6.8
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 129 bits (311), Expect = 3e-30
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VDVLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 103
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 126 bits (305), Expect = 2e-29
Identities = 59/101 (58%), Positives = 76/101 (75%)
Frame = +1
Query: 82 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 261
++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+ VD
Sbjct: 1 DQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVD 60
Query: 262 VLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VLDS D+AHL L++RPELG+T TK+H W+LTQY KCVF+DA
Sbjct: 61 VLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDA 101
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 121 bits (291), Expect = 9e-28
Identities = 61/112 (54%), Positives = 75/112 (66%)
Frame = +1
Query: 49 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 228
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 229 RAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VF EV+ V+++DS D HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 136
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 121 bits (291), Expect = 9e-28
Identities = 61/112 (54%), Positives = 75/112 (66%)
Frame = +1
Query: 49 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 228
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 229 RAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VF EV+ V+++DS D HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 136
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 121 bits (291), Expect = 9e-28
Identities = 61/112 (54%), Positives = 75/112 (66%)
Frame = +1
Query: 49 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 228
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 229 RAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
VF EV+ V+++DS D HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 136
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 118 bits (285), Expect = 5e-27
Identities = 59/103 (57%), Positives = 72/103 (69%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
V+++DS D HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 105
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 118 bits (285), Expect = 5e-27
Identities = 59/103 (57%), Positives = 72/103 (69%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 255
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 256 VDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
V+++DS D HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 105
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 109 bits (263), Expect = 2e-24
Identities = 55/94 (58%), Positives = 63/94 (67%)
Frame = +1
Query: 103 ATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDA 282
ATND Y GALVL SLRR V LITP VS +R L VF EV+ V+++DS D
Sbjct: 3 ATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADY 62
Query: 283 AHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 63 IHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 96
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 72.1 bits (169), Expect = 6e-13
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +1
Query: 244 EVVTVDVLDSRDAAHLALLQRPELGITFTKIHWWNLTQYEKCVFLDA 384
EV+ V+++DS D HLA L+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 2 EVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDA 48
>U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon
protein.
Length = 298
Score = 51.6 bits (118), Expect = 8e-07
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 301 QRPELGITFTKIHWWNLTQYEKCVFLDA 384
+RPELG+T TK+H W LT Y KCVFLDA
Sbjct: 1 KRPELGLTLTKLHCWTLTHYSKCVFLDA 28
>AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ44103 fis, clone TESTI4044084. ).
Length = 161
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 201 GRCDECYGRVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCS 58
G C + G+ +GA R QHQ+ + Q PC H AGCS
Sbjct: 22 GHCPQFQGKKQMSGARAR-AQHQAHSSQESTQCQVSPCPAWHPRAGCS 68
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 195
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 195
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 195
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 363 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 402
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 76 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 195
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subunit
protein.
Length = 980
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 108 KRLLRLGSSGAGPFAPPRRLGVPCRST 188
+R+ L +SGAG APPR LGVP +T
Sbjct: 937 RRIQALRASGAG--APPRGLGVPAEAT 961
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 169 PSRRGGANGPAPELPSRRSRLWPELPML 86
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 169 PSRRGGANGPAPELPSRRSRLWPELPML 86
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 169 PSRRGGANGPAPELPSRRSRLWPELPML 86
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 169 PSRRGGANGPAPELPSRRSRLWPELPML 86
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 169 PSRRGGANGPAPELPSRRSRLWPELPML 86
PS+R P+ E+PS+R P+LP+L
Sbjct: 34 PSKRALPRDPSSEVPSKRKNSAPQLPLL 61
>EF417879-1|ABN50332.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 55 ETTPGFIMSNRAWVTLATNDSYGLGALVLAHS 150
+T + R W+ +ATND +G G LV S
Sbjct: 76 DTAVYYCARERGWLEMATNDYWGQGTLVTVSS 107
>EF417878-1|ABN50331.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 55 ETTPGFIMSNRAWVTLATNDSYGLGALVLAHS 150
+T + R W+ +ATND +G G LV S
Sbjct: 76 DTAVYYCARERGWLEMATNDYWGQGTLVTVSS 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,257,666
Number of Sequences: 237096
Number of extensions: 1028668
Number of successful extensions: 2898
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2898
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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