Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2076
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   1.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   3.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   5.9  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   5.9  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    21   5.9  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    21   5.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   5.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.9  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 107 ETPVVAAVHTPVIHTVPIVAAKTTVTKSSQVVNH 208
           + P++  +  PV+ +     +  T TKS+ V NH
Sbjct: 311 QCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNH 344



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +1

Query: 328 PNRPHRSCSCEDRPRCHRSQFLRGAPPHSH 417
           P + HRS S       H  +   G P  SH
Sbjct: 279 PVKQHRSSSASTTCSGHTVRCFTGGPRKSH 308


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 65  LLACTAAAPGLLLHETPVVAAVHTPVIH 148
           LLA    A G + H  P  A  H  ++H
Sbjct: 8   LLALLTLAAGEIAHNDPHFAPGHDAIVH 35


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 352 YRSGVDDWDRV 320
           YR  +D+WDR+
Sbjct: 126 YRIAIDEWDRL 136


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 85  CTRPAPPRNPSG 120
           CT P+PPR P G
Sbjct: 394 CT-PSPPRGPGG 404


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 259 NHGCGMDHRGGMYQSGT 209
           +HG GMD  GG Y+S +
Sbjct: 99  DHGSGMDGMGG-YRSAS 114


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 137 EYGQQLPLGFRGGAGR 90
           EY ++ P+GF+G  G+
Sbjct: 105 EYYKRAPMGFQGMRGK 120


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 137 EYGQQLPLGFRGGAGR 90
           EY ++ P+GF+G  G+
Sbjct: 106 EYYKRAPMGFQGMRGK 121


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 137 EYGQQLPLGFRGGAGR 90
           EY ++ P+GF+G  G+
Sbjct: 105 EYYKRAPMGFQGMRGK 120


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 137 EYGQQLPLGFRGGAGR 90
           EY ++ P+GF+G  G+
Sbjct: 105 EYYKRAPMGFQGMRGK 120


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 388 FLRGAPPHSH 417
           FLR  PP+SH
Sbjct: 144 FLRTVPPYSH 153


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +3

Query: 216 LWYIPPLWSMPHPWFMPHTW 275
           L+Y+ P +    P +  H W
Sbjct: 408 LYYLKPSYDAQEPAWKTHVW 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,463
Number of Sequences: 438
Number of extensions: 2402
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)