Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2075
         (382 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TGV5 Cluster: Putative uncharacterized protein; n=1; ...    32   3.2  
UniRef50_Q4P0K5 Cluster: Putative uncharacterized protein; n=1; ...    31   7.3  

>UniRef50_A7TGV5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 413

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
 Frame = -3

Query: 377 DHFHFR-ILSSA----TTNP*IRIVD*INRILICESA 282
           DHFHF  IL SA    T NP ++ +D +N+ L+CE A
Sbjct: 215 DHFHFAYILGSAQWSETNNPPLKPMDIVNKDLVCEYA 251


>UniRef50_Q4P0K5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 867

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 59  RLTPARHQDPPPPNSAAAD 3
           R+ P+ H DPPPP S A D
Sbjct: 669 RMVPSEHDDPPPPLSPAVD 687


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,346,739
Number of Sequences: 1657284
Number of extensions: 4408783
Number of successful extensions: 10855
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10831
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)