Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2074
         (444 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0UFG8 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_Q17DQ2 Cluster: Putative uncharacterized protein; n=1; ...    33   2.8  
UniRef50_UPI0000D9B73C Cluster: PREDICTED: hypothetical protein;...    32   4.8  
UniRef50_A5UU27 Cluster: Glycoside hydrolase family 2, sugar bin...    32   4.8  
UniRef50_Q8I5L7 Cluster: Formin 2, putative; n=1; Plasmodium fal...    31   8.5  
UniRef50_Q9BWE0 Cluster: Replication initiator 1; n=13; Mammalia...    31   8.5  

>UniRef50_Q0UFG8 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 1038

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 262 CPQLTYHFRAHSTVSHRIGCPQHRRRRCLESQRLPDLPPCTHTPQNF 402
           C +L+ H  AH+    R+GC Q +R     +  L   PP +H   NF
Sbjct: 606 CDELSMHPLAHAWAKDRLGCEQQQRAWLSAACTLILSPPVSHEAANF 652


>UniRef50_Q17DQ2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 631

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +3

Query: 384 THSAKFPIEREVILSSGE 437
           THS+KFPIERE++LSS +
Sbjct: 36  THSSKFPIERELVLSSNK 53


>UniRef50_UPI0000D9B73C Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 217

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 12  RAQKAKQTKITASLEHNVSLRHEKKRLSRRNKKKYKEKSR 131
           ++ K  +T + +  E     R EKKR  RR KKK KEK +
Sbjct: 105 QSNKPNRTPLGSIQEEEEEERREKKREERREKKKKKEKEK 144


>UniRef50_A5UU27 Cluster: Glycoside hydrolase family 2, sugar
           binding; n=4; Chloroflexaceae|Rep: Glycoside hydrolase
           family 2, sugar binding - Roseiflexus sp. RS-1
          Length = 739

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +1

Query: 217 FNQASWIPDDEVFRACPQLTYHFRAHSTVSHRIGCPQHRRRRCLESQRLPDLPPCTHTP 393
           F Q  + PDD+ + A  ++  H++ H  +    GC  +RRR  L     P +PP    P
Sbjct: 22  FRQGFYPPDDDTWLA-QEIPAHWQQHPLLERYAGCMVYRRRFTLPD--APAIPPDQSAP 77


>UniRef50_Q8I5L7 Cluster: Formin 2, putative; n=1; Plasmodium
           falciparum 3D7|Rep: Formin 2, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 2974

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 22  KPNRQKSQLHWSTTYPYDTRKNVYRDEIK--KNTKKNLE*PNFL 147
           K NR+KS L+ + TY  D  +N+Y +  K  +NT  N+   N++
Sbjct: 56  KENRKKSLLNMNKTYKEDDERNIYYNNNKTDENTYNNVVDDNYI 99


>UniRef50_Q9BWE0 Cluster: Replication initiator 1; n=13;
           Mammalia|Rep: Replication initiator 1 - Homo sapiens
           (Human)
          Length = 567

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 18/47 (38%), Positives = 19/47 (40%)
 Frame = +1

Query: 253 FRACPQLTYHFRAHSTVSHRIGCPQHRRRRCLESQRLPDLPPCTHTP 393
           FR    L  H RAHS     I CP+  RR     Q    L  C H P
Sbjct: 125 FRGWVALVLHLRAHSAAKRPIACPKCERRFWRRKQLRAHLRRC-HPP 170


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,858,896
Number of Sequences: 1657284
Number of extensions: 7445126
Number of successful extensions: 27444
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26045
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)