Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2074
         (444 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    27   8.7  
AY051958-1|AAK93382.1|  466|Drosophila melanogaster LD42637p pro...    27   8.7  
AE014298-1323|AAF46484.1|  466|Drosophila melanogaster CG16892-P...    27   8.7  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    27   8.7  

>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 342 APPPVLGASYTVGHCRVCSEMIRKLRASPKYLVVWDPACLIKY 214
           AP P   AS  + +  +C+E++ K   S  + V WD A ++ Y
Sbjct: 301 APGPYTNASGFLAYYEICTEVMDK---SKGWTVEWDDAGMVPY 340


>AY051958-1|AAK93382.1|  466|Drosophila melanogaster LD42637p
           protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 218 LIRQAGSQTTRYFGLALNLRIISEHTRQ 301
           LI QAG    ++ GLA  LRI+  HT+Q
Sbjct: 94  LIAQAGDLIAQFLGLATGLRIL-PHTQQ 120


>AE014298-1323|AAF46484.1|  466|Drosophila melanogaster CG16892-PA
           protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 218 LIRQAGSQTTRYFGLALNLRIISEHTRQ 301
           LI QAG    ++ GLA  LRI+  HT+Q
Sbjct: 94  LIAQAGDLIAQFLGLATGLRIL-PHTQQ 120


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 342 APPPVLGASYTVGHCRVCSEMIRKLRASPKYLVVWDPACLIKY 214
           AP P   AS  + +  +C+E++ K   S  + V WD A ++ Y
Sbjct: 301 APGPYTNASGFLAYYEICTEVMDK---SKGWTVEWDDAGMVPY 340


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,962,416
Number of Sequences: 53049
Number of extensions: 361543
Number of successful extensions: 1317
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)