Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2074
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    25   0.49 
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    25   0.49 
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    25   0.49 
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    25   0.49 
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    25   0.49 
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    25   0.49 
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    25   0.49 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          25   0.49 
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          25   0.49 
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          25   0.49 
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          25   0.49 
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          25   0.49 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          25   0.49 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          25   0.49 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    25   0.49 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   2.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.1  

>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 23  HNVEEKHLRERTSRRRYSRSREREQ 47


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 271 HNVEEKHLRERTSRRRYSRSREREQ 295


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 57  HNVSLRHEKKRLSRRNKKKYKEKSR 131
           HNV  +H ++R SRR   + +E+ +
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 271 LTYHFRA-HSTVSHRIGCPQHRRRRCLESQRLPDLPP 378
           + Y+ ++ ++T   R+G   HR    +  +R P  PP
Sbjct: 186 MPYYLKSENNTELSRVGTKYHRSGGLMNVERFPYQPP 222


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 38  FCLFGFLSTI 9
           +CLF FL+TI
Sbjct: 148 YCLFSFLNTI 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,838
Number of Sequences: 438
Number of extensions: 2339
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)