Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2073
         (397 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22179-13|CAA80166.1|  164|Caenorhabditis elegans Hypothetical p...    27   4.9  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    27   4.9  

>Z22179-13|CAA80166.1|  164|Caenorhabditis elegans Hypothetical
           protein F58A4.10 protein.
          Length = 164

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 264 VTSARQLYENYSKYKLTIFECVKKSE 341
           V +A+   ENY+++K  + +CV++S+
Sbjct: 137 VDAAKMQRENYAEFKKKVAQCVRRSQ 162


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 276  RQLYENYSKYKLTIFECVKKSE 341
            RQL ENY  ++ T+  C+KK +
Sbjct: 3739 RQLVENYEIFRTTLQSCLKKCD 3760


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,299,559
Number of Sequences: 27780
Number of extensions: 110076
Number of successful extensions: 168
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)