Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2069
(454 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 31 0.33
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 1.0
12_02_0904 - 24181766-24181809,24181888-24182066,24182424-241824... 29 1.3
07_01_0262 + 1957973-1958220,1958272-1958935 29 1.7
06_02_0201 - 12960493-12960606,12960727-12960853,12961100-129612... 29 1.7
02_01_0085 + 610872-611297 29 1.7
11_06_0692 + 26327487-26328509 29 2.3
01_01_0957 + 7516314-7517489 29 2.3
01_01_0601 - 4476261-4476728 29 2.3
12_02_1215 + 27070164-27070302,27070308-27071098 28 4.0
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987... 28 4.0
10_08_0350 + 17066058-17066235,17067084-17067223 28 4.0
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 27 5.3
03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007 27 5.3
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 27 5.3
11_06_0215 - 21332429-21333037,21333605-21333649 27 7.1
11_01_0045 + 346817-347168,347582-347713,347790-347968,348654-34... 27 7.1
10_07_0131 + 13258506-13258628,13258737-13258889 27 7.1
06_03_1235 + 28593906-28594412,28594670-28594756,28594890-285950... 27 7.1
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 27 7.1
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 27 7.1
04_03_0365 - 14950398-14950880,14950967-14951262,14951277-149514... 27 7.1
04_03_0314 - 14238620-14240128 27 7.1
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 27 7.1
03_02_0172 - 6131559-6131990 27 7.1
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 27 7.1
06_03_1393 + 29846884-29847465 27 9.3
06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338 27 9.3
06_01_0783 + 5857950-5857979,5859474-5860424 27 9.3
03_01_0272 + 2105579-2105671,2105779-2105882,2106006-2107014,210... 27 9.3
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 31.5 bits (68), Expect = 0.33
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -3
Query: 431 PFRGHRRRCRPDAASSAR-LPPRWTGVRCRSGSSLSPSQPFRQ-LESIDLSSKTWVSNP 261
P R H R C P AAS+ + PP R RS SS S S R+ + +I L ++NP
Sbjct: 30 PLRPHVRCCSPAAASTTKPPPPPPQDRRRRSASSSSSSTSDRESIRAIRLKKVLLLANP 88
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.9 bits (64), Expect = 1.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 164 NLCVNFVCSDHLICRYA 214
NLC +C +H +CRYA
Sbjct: 467 NLCWKLICMEHAVCRYA 483
>12_02_0904 -
24181766-24181809,24181888-24182066,24182424-24182464,
24182829-24182860,24183816-24184140
Length = 206
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 340 PERHRTPVHRGGRRALEAASGRHRRRCPRNGTP 438
P HR+P RG A AA+G RC R TP
Sbjct: 50 PPLHRSPRRRGQGAAGVAAAGPRGGRCSRRRTP 82
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 315 WLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 452
WLR+ S CP RR+ S ++ S P S AG A +
Sbjct: 85 WLRQASSSSAPVAVGCPTRRRPSPAAAAEKCSLPASPPTTAGVARR 130
>06_02_0201 -
12960493-12960606,12960727-12960853,12961100-12961276,
12961864-12961975,12964141-12964144
Length = 177
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 439 PAFHFADIGVDVGRTLLQALVFLLGGQGSGAVRDRL*VRLSHSD 308
P HF D D+GRTL Q +V +L + ++L R+ H +
Sbjct: 102 PTVHFVDEHYDIGRTLAQRVVSMLAND----ILEQLATRVLHEE 141
>02_01_0085 + 610872-611297
Length = 141
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +3
Query: 321 RRTQRRSRTAPDP---CPPRRKTS 383
RR RSR APDP CPP R+ S
Sbjct: 82 RRRSARSRAAPDPPTSCPPSRQIS 105
>11_06_0692 + 26327487-26328509
Length = 340
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 345 TAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS 449
TAP P PP+R S S P SA+ G+A+
Sbjct: 237 TAPPPPPPKRSPSPSPSPSPAPAAASARGGRGAAT 271
>01_01_0957 + 7516314-7517489
Length = 391
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 328 LRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEAR 447
++D+P R ++G AA+ R RRR P G PE R
Sbjct: 180 VKDNPFLMRDRENKGNDGGAAAAAARWRRRDPFEGYPERR 219
>01_01_0601 - 4476261-4476728
Length = 155
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 364 HRGGRRALEAASGRHRRRCPRNGTPEARR 450
HRG RRA+ GRHR R R EA R
Sbjct: 44 HRGRRRAVTGDGGRHRER--RRAAREAAR 70
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 RHRTPVHRGGRRALEAASGRHRRRC 420
R P GGRR L AA R RRRC
Sbjct: 67 RASRPDLEGGRRQLAAAVRRRRRRC 91
>12_02_0506 -
19794383-19794670,19795066-19795140,19795337-19798704,
19799503-19799671,19799758-19799850
Length = 1330
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 425 RGHRRRCRPDAASSARLPPR 366
R RRR RP AAS A PPR
Sbjct: 55 RAQRRRTRPAAASVALAPPR 74
>10_08_0350 + 17066058-17066235,17067084-17067223
Length = 105
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS 449
RT RR R P PP+ + S S R ++P+S N G A+
Sbjct: 18 RTARR-RIFPQMQPPKARASRASDQRRVASPLSKSENDGDAA 58
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 323 TDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKR 445
TD+E+ N GP++ EE +++ R A E+E RK+
Sbjct: 551 TDTESCTNKQGPVAAEENNKKCCPRKQASMALGTEIEERKK 591
>03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007
Length = 261
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 430 HFADIGVDVGRTLLQALVFLLGGQGSGAV 344
H D+GV G+ L+ A+ LLGG G V
Sbjct: 208 HLEDVGVKHGKHLVDAVRDLLGGGDPGGV 236
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -3
Query: 368 RWTGVRCRSGSSLSPSQ----PFRQLESIDLSSKTWVSNPVARVLQESCTVQQMARR 210
R+ G+R SG + Q P ++ S+D+ S VSN +V + C + R+
Sbjct: 333 RYVGIRLASGQDILCQQLILDPSYEIPSLDMPSDAPVSNLPRKVARGICIISSSVRQ 389
>11_06_0215 - 21332429-21333037,21333605-21333649
Length = 217
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 308 VGMAETDSETIPNGTGPLSTEEEDERL-KQRPADIDADVREMERRK 442
+ +A+ DS+T+P+ T P + R+ K+RP D+ + + + K
Sbjct: 77 INIAKEDSDTLPSPTCPDNFSPGTSRVSKKRPRDVKSPSKRQPKPK 122
>11_01_0045 +
346817-347168,347582-347713,347790-347968,348654-348789,
348974-349070,349206-349306,349618-349781,349867-349938,
350034-350150,350235-350369,350421-350532,351197-351513,
353065-353265,353467-353544
Length = 730
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 434 VPFRGHRRRCRPDAASSARLPPRWTGVRCR 345
+ F RR CR SA PPRW RCR
Sbjct: 27 ISFPFSRRHCR-----SAAPPPRWRPTRCR 51
>10_07_0131 + 13258506-13258628,13258737-13258889
Length = 91
Score = 27.1 bits (57), Expect = 7.1
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 413 RRCRPDAASSARLPPRWTGVRCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESC 234
RR R A+S+AR+ G +L P R + + P ARVLQE+C
Sbjct: 3 RRSRSRASSAARITDEQIGDLVSKLQALLPEARLRSNDRV----------PSARVLQETC 52
Query: 233 T-VQQMARRSDKLDDHYTQ 180
+ ++ + R D L + +
Sbjct: 53 SYIRSLHREVDDLSERLAE 71
>06_03_1235 +
28593906-28594412,28594670-28594756,28594890-28595027,
28595752-28595771,28595772-28595967,28596104-28596168,
28596299-28596404
Length = 372
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 5 SVLNFFERTKLMK*RLYMRCLLS*CCKNYKENDKCVFLQI*CFVLSACYDR 157
S ++ + K + LY +L CC N +D+ + + F + + YDR
Sbjct: 204 SFMHIAKSVKATELNLYEDAILDACCHNIPADDELWYRAVEFFCIGSRYDR 254
>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
Length = 974
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 158 GDRNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 33
G+ N H A N + + YR L FYS S + A VI L+
Sbjct: 854 GNSNDHAAGNPVMHDKKRYRYLIFFYSNSTSFVASIVVIILL 895
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SS 395
R R TAP CPP+R SA S+
Sbjct: 473 RVTARPTTAPGGCPPKRPASAPSA 496
>04_03_0365 -
14950398-14950880,14950967-14951262,14951277-14951413,
14951562-14952039,14952203-14952215
Length = 468
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SS 395
R R TAP CPP+R SA S+
Sbjct: 396 RVTARPTTAPGGCPPKRPASAPSA 419
>04_03_0314 - 14238620-14240128
Length = 502
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 419 HRRRCR-PDAASSARLPPRWTGVRCRSGSSLSPS 321
H RR R P+ S PP T VRC + +PS
Sbjct: 20 HPRRVRLPNPPPSTAAPPTPTAVRCTPAPAAAPS 53
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 333 RRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 452
R ++T P P PP +++ R + P K +G AS+
Sbjct: 90 REAKTLPPPLPPSSSSASPPPERSPAKPHGRKEGSGGASR 129
>03_02_0172 - 6131559-6131990
Length = 143
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 443 ASGVPFRGHRRRCRPDAASSARLPPRWTGVRCRSGSSLSPSQP 315
A+ VPF R R A + PPR + C+S SPS+P
Sbjct: 13 AAAVPFMRGSRHPRGRRADAVSRPPRSSSFLCQSS---SPSEP 52
>02_05_0444 - 29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 449 RRASGVPFRGHRRRCRPDAASSARLPPRWTG 357
RR S +R RR RP ++S+A +PP G
Sbjct: 971 RRRSAPHWRAIRRSQRPSSSSAAAVPPSSVG 1001
>06_03_1393 + 29846884-29847465
Length = 193
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 294 NRLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 452
NRL RR Q T P P K+ + SS RP ++ SA +A +A++
Sbjct: 65 NRLRARNQARRVQEF--TPPAPLGITMKSKSSSSSRPAASKSSASASASAATR 115
>06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338
Length = 740
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 158 GDRNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 33
G+ N H A + + R YR L FYS S + A VI L+
Sbjct: 615 GNSNGHAAGDPVMHDNRRYRYLIFFYSNSFSFMASIVVIILL 656
>06_01_0783 + 5857950-5857979,5859474-5860424
Length = 326
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 336 RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 452
+S A P P +K SA RPT+TP A A +ASK
Sbjct: 240 KSSPARHPDSPVKKASA----RPTTTPGKANGKADTASK 274
>03_01_0272 +
2105579-2105671,2105779-2105882,2106006-2107014,
2107130-2107153
Length = 409
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 338 SSLSPSQPFRQLESIDLSSKTWVSN 264
S SPS P +Q S+D S TW+ +
Sbjct: 291 SDYSPSTPSKQEVSVDASLSTWLGS 315
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,355,115
Number of Sequences: 37544
Number of extensions: 266473
Number of successful extensions: 1337
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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