Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2068
         (384 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E2I9 Cluster: Putative uncharacterized protein; n=1; ...    33   1.4  
UniRef50_A2F624 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  

>UniRef50_A2E2I9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 479

 Score = 33.5 bits (73), Expect = 1.4
 Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +2

Query: 68  HHFQRKFYYYAELTIKFHGIDFEL*NKIADPLI*IFRSVFD*DAIAILL-*TFTFLQNLD 244
           +   +K++    L I F+G  F++ N+  +PL  + ++++D +   IL+  +FT L  + 
Sbjct: 355 YELMKKYFVLDALIINFYGYSFKIHNRSINPLFTLMKNLYDPELAEILVQRSFTDLV-VS 413

Query: 245 RLQGFISEDPFGKIYLLI 298
           +L+G+ S+D    + + I
Sbjct: 414 KLEGY-SDDTLTNMLIAI 430


>UniRef50_A2F624 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 399

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = +3

Query: 96  MRN*QSNFMVSILNCKIKSRTH*SRYFAVFLIKMRLLYYYELLLFCKIWTDCRGLYQRIP 275
           ++N  + F  +I N K  +R H + + A  L    + +    +   K W      Y RI 
Sbjct: 258 LKNAYNPFQATISNPKTLARLHRASFAAESLANCGIDFLNSTITALKDWISLDPAYTRIQ 317

Query: 276 SAKSTYLFRWTRSF 317
             + TY   W RSF
Sbjct: 318 IKEETYNKLWARSF 331


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,647,286
Number of Sequences: 1657284
Number of extensions: 6827835
Number of successful extensions: 12842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12839
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)