Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2068
         (384 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113287-1|AAM29292.1|  397|Drosophila melanogaster AT20383p pro...    28   3.6  
AE014134-1319|AAN10641.1|  542|Drosophila melanogaster CG7075-PB...    28   3.6  
AE014134-1318|AAF52543.2|  590|Drosophila melanogaster CG7075-PA...    28   3.6  

>AY113287-1|AAM29292.1|  397|Drosophila melanogaster AT20383p
           protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 204 LYYYELLLFCKIWTDCRGLYQRIPSAKSTYLFRWTRSFFCRAMP*VCYYFI 356
           L+Y E+L+     T C G+++  P  K T + +   + +C     VCYY +
Sbjct: 77  LFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYC-----VCYYSV 122


>AE014134-1319|AAN10641.1|  542|Drosophila melanogaster CG7075-PB,
           isoform B protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 204 LYYYELLLFCKIWTDCRGLYQRIPSAKSTYLFRWTRSFFCRAMP*VCYYFI 356
           L+Y E+L+     T C G+++  P  K T + +   + +C     VCYY +
Sbjct: 29  LFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYC-----VCYYSV 74


>AE014134-1318|AAF52543.2|  590|Drosophila melanogaster CG7075-PA,
           isoform A protein.
          Length = 590

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 204 LYYYELLLFCKIWTDCRGLYQRIPSAKSTYLFRWTRSFFCRAMP*VCYYFI 356
           L+Y E+L+     T C G+++  P  K T + +   + +C     VCYY +
Sbjct: 77  LFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYC-----VCYYSV 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,357,141
Number of Sequences: 53049
Number of extensions: 311741
Number of successful extensions: 440
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)