Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2068
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.5  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   6.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   8.6  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 64  VASLPAQILLLCGTNNQISWY 126
           V SLP  I+    T+  ++WY
Sbjct: 166 VCSLPQTIVFHLETHPNVTWY 186


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 92  YYAELTIKFHG 124
           YYA L  K+HG
Sbjct: 717 YYANLYTKYHG 727


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -2

Query: 200 SHLNQKHCEISRSVGPRFYFTVQNRYHEI*LLVPHNNKIC 81
           S  ++K   I   +GP  +      Y +I  ++   NK+C
Sbjct: 234 STTDKKGSAIDLDIGPPLHADQAEEYKKIQQILIRMNKLC 273


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 243 SKFCKKVKVHNNIAIAS 193
           SK  K+VK+ ++IAI S
Sbjct: 162 SKLLKQVKIPHDIAINS 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,767
Number of Sequences: 438
Number of extensions: 2307
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)