Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2067
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 130 8e-31
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 129 1e-30
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 129 1e-30
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 129 1e-30
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 129 1e-30
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 126 1e-29
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 124 3e-29
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 124 4e-29
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 113 6e-26
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 58 3e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 54 9e-08
12_02_1282 + 27528159-27529148,27529549-27529614 52 2e-07
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 52 3e-07
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 47 1e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 1e-04
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 40 0.002
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 34 0.058
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 0.72
11_06_0126 - 20378611-20379719,20380081-20381239 30 1.3
08_02_0238 + 14665813-14668798,14669088-14669125 29 2.2
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 2.2
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 29 2.9
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 28 3.8
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 28 3.8
09_02_0456 - 9525067-9525422,9525679-9528226 27 6.7
03_02_0028 - 5118621-5119448 27 6.7
02_05_0615 - 30364956-30365729,30365813-30366286 27 6.7
11_06_0094 - 20007535-20007658,20007759-20008367,20009021-200090... 27 8.8
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512... 27 8.8
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 27 8.8
04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656... 27 8.8
03_06_0303 - 32994697-32994831,32994959-32995096,32995205-329952... 27 8.8
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 130 bits (313), Expect = 8e-31
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 304 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 363
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 364 SGPSIVHRKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 129 bits (312), Expect = 1e-30
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDE 366
Query: 326 SGPSIVHRKCF 294
SGP+IVHRKCF
Sbjct: 367 SGPAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 129 bits (312), Expect = 1e-30
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDE 366
Query: 326 SGPSIVHRKCF 294
SGP+IVHRKCF
Sbjct: 367 SGPAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 129 bits (311), Expect = 1e-30
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 310 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 369
Query: 326 SGPSIVHRKCF 294
SGP+IVHRKCF
Sbjct: 370 SGPAIVHRKCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 129 bits (311), Expect = 1e-30
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 126 bits (304), Expect = 1e-29
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+E
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEE 366
Query: 326 SGPSIVHRKCF 294
SGP+IVHRKCF
Sbjct: 367 SGPAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 124 bits (300), Expect = 3e-29
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+IT+L PS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 306 MFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 365
Query: 326 SGPSIVHRKCF 294
SGP IVH KCF
Sbjct: 366 SGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 56/71 (78%), Positives = 61/71 (85%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL P +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 306 MFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 365
Query: 326 SGPSIVHRKCF 294
SGP IVH KCF
Sbjct: 366 SGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 113 bits (273), Expect = 6e-26
Identities = 58/85 (68%), Positives = 64/85 (75%), Gaps = 14/85 (16%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ----------- 360
M+P I M K+ITAL PS+MKIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEV 366
Query: 359 ---QMWISKQEYDESGPSIVHRKCF 294
QMWISK EYDESGP+IVHRKCF
Sbjct: 367 ARMQMWISKGEYDESGPAIVHRKCF 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -2
Query: 467 TALPPSTMKIKIIAPPE-RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
+A+ PS +K P +YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 340 SAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 53.6 bits (123), Expect = 9e-08
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = -2
Query: 482 MQKKITALPPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 336
++K++ ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 418 LEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/71 (47%), Positives = 38/71 (53%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
M+P I M K+ITAL PS+MKIK MWI+K EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIK--------------------------MWIAKAEYDE 340
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 341 SGPSIVHRKCF 351
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = -2
Query: 506 MYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
++P ++K++ L P ++KIIA + W GGS+LA F+ M I+K EY+E
Sbjct: 358 LFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEE 417
Query: 326 SGPSIVHRKCF 294
G R+ F
Sbjct: 418 MGSMRCRRRFF 428
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -2
Query: 446 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 312
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -2
Query: 446 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 312
+++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Frame = -2
Query: 500 PEIPTGMQKKITALPPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYD 330
P + ++K++ L P+ + I++I PP S W G +++++STF + W I K+++
Sbjct: 411 PGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFR 470
Query: 329 E----SGPSIVH 306
+ +GPS V+
Sbjct: 471 QKTRRNGPSFVN 482
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 34.3 bits (75), Expect = 0.058
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -2
Query: 512 PPMYPEIPTGMQKKITALPPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 333
P M P + +G+++ L P +K++ + W G + A+ S F + S +Y
Sbjct: 636 PGMIPRLESGIRQFRPYLSP----LKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADY 691
Query: 332 DESGPSIVHRK 300
E G ++ HRK
Sbjct: 692 REHGENLFHRK 702
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 30.7 bits (66), Expect = 0.72
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -2
Query: 446 MKIKIIAPPERKYSVWIGGSILASL 372
++++I PP RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 390 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTGGDFRVH 506
++DP G+L W+ +D + CRW G +C L TG R+H
Sbjct: 48 TSDPLGLLTSWKEDDHDC-CRWRGVTCSNL--TGHVLRLH 84
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 390 STDPYGVLPLWRSNDLNLHCRW-GESC 467
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 259 RAAGGSDARCV*KHFLCTMEGPDS 330
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 259 RAAGGSDARCV*KHFLCTM----EGPDSSYSCFEIHICWK 366
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 357 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTGG 491
+L+ E S P +LPL NDL+ RWG + GG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWGGGLSSVEGQGG 446
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -3
Query: 412 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 233
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 232 N 230
N
Sbjct: 272 N 272
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 393 TDPYGVLPLWRSNDLNLHCRWGE-SCD 470
TDP L WR +DL CRW +CD
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACD 69
>03_02_0028 - 5118621-5119448
Length = 275
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -3
Query: 337 STTSLA---PPLYTGSASKRTARRCLQQPAAG 251
+TT LA PP + GS +R RR QQP G
Sbjct: 22 TTTLLATDHPPFFPGSCPRRVPRRRPQQPPPG 53
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 364 SNRC-GSRNRSTTSLAPPLYTGSASKRTARRCLQQ 263
+N C G +T + APP Y AS RTA R L++
Sbjct: 256 NNDCHGGDPNATAATAPPEYAVRASFRTALRALRE 290
>11_06_0094 -
20007535-20007658,20007759-20008367,20009021-20009094,
20009187-20009837
Length = 485
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 357 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRW-GESC 467
LLE +EG D +T G+L WR D CRW G C
Sbjct: 56 LLEFKEGIADDTT---GLLASWRPEDGQDCCRWTGVRC 90
>07_03_0463 -
18449908-18450171,18450718-18450810,18451170-18451254,
18451607-18451705,18452099-18452238,18453036-18453482
Length = 375
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 192 ITIISYVQLN*RRLQA*IEQPAAGCWR 272
+T + +V L RLQ +E PAA CWR
Sbjct: 245 LTFVPFVVL---RLQKFLESPAATCWR 268
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -3
Query: 400 GSVDRSSPPSLPSNRC----GSRNRSTTSLAPPLYTGSASKRTARRCLQQPAAGCS 245
G R PP PS+ G + + S A P+ S SKR RR ++ +GCS
Sbjct: 68 GEARRRIPPKAPSSDASLSDGGGSEGSDSGAAPIE--SPSKRPRRRLVEHGHSGCS 121
>04_01_0501 -
6558120-6559312,6559441-6559518,6559818-6559877,
6560000-6560083,6560407-6560566
Length = 524
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 257 RGLLEAATRGAFRSTSCVQWRGQ 325
RG +AATRGA RS+S W+ +
Sbjct: 3 RGESKAATRGANRSSSSSSWKSR 25
>03_06_0303 -
32994697-32994831,32994959-32995096,32995205-32995282,
32995399-32995475,32996355-32996676,32996756-32996986
Length = 326
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 334 TTSLAPPLYTGSASKRTARRCLQQPA 257
TT A P+ S+S RRC+ QPA
Sbjct: 4 TTMKASPMSASSSSAPVLRRCVAQPA 29
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,719,877
Number of Sequences: 37544
Number of extensions: 296033
Number of successful extensions: 857
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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