Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2066
(331 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of ... 47 1e-05
D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c pr... 47 1e-05
CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein. 47 1e-05
BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+ transp... 47 1e-05
BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+ transp... 47 1e-05
X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene ... 46 2e-05
D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c pr... 46 2e-05
BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein. 46 2e-05
U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthas... 42 3e-04
M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein. 42 3e-04
CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein. 42 3e-04
BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+ transp... 42 3e-04
AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein. 42 3e-04
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein. 34 0.12
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 34 0.12
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ... 34 0.12
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 34 0.12
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 34 0.12
AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein. 34 0.12
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 32 0.49
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 32 0.49
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 31 0.86
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 31 0.86
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 31 0.86
AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens ... 31 0.86
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 31 0.86
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 31 0.86
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 31 0.86
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 31 0.86
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 31 0.86
BC094778-1|AAH94778.1| 468|Homo sapiens midnolin protein. 31 1.1
AK098809-1|BAC05419.1| 320|Homo sapiens protein ( Homo sapiens ... 30 1.5
L07868-1|AAB59446.1| 1308|Homo sapiens receptor tyrosine kinase ... 30 2.0
DQ012014-1|AAY59750.1| 62|Homo sapiens beta-defensin 110 protein. 30 2.0
BC130578-1|AAI30579.1| 1935|Homo sapiens ADAM metallopeptidase w... 30 2.0
BC112199-1|AAI12200.1| 1308|Homo sapiens v-erb-a erythroblastic ... 30 2.0
AF488803-1|AAO15765.1| 1935|Homo sapiens a disintegrin-like and ... 30 2.0
AC105921-1|AAY24303.1| 552|Homo sapiens unknown protein. 30 2.0
AB209697-1|BAD92934.1| 892|Homo sapiens v-erb-a erythroblastic ... 30 2.0
AB037733-1|BAA92550.1| 1471|Homo sapiens KIAA1312 protein protein. 30 2.0
BC012915-1|AAH12915.1| 524|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AL365187-6|CAI13527.1| 524|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AL365187-4|CAI13525.1| 184|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AL365187-3|CAI13523.1| 255|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AL365187-2|CAI13524.1| 253|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AL365187-1|CAI13522.1| 326|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AL109845-2|CAI22239.1| 524|Homo sapiens OMA1 homolog, zinc meta... 29 4.6
AB048348-1|BAC79381.1| 524|Homo sapiens metalloprtease related ... 29 4.6
M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein. 28 6.0
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein. 28 6.0
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein. 28 6.0
BC125118-1|AAI25119.1| 870|Homo sapiens ADAM metallopeptidase d... 28 6.0
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein. 28 6.0
BC026018-1|AAH26018.2| 1083|Homo sapiens LAMB1 protein protein. 28 6.0
BC014297-1|AAH14297.1| 566|Homo sapiens F-box and WD repeat dom... 28 6.0
BC014130-1|AAH14130.1| 566|Homo sapiens F-box and WD repeat dom... 28 6.0
AL807752-5|CAI12746.1| 129|Homo sapiens F-box and WD repeat dom... 28 6.0
AL807752-4|CAI12744.1| 200|Homo sapiens F-box and WD repeat dom... 28 6.0
AL807752-3|CAI12743.1| 566|Homo sapiens F-box and WD repeat dom... 28 6.0
AK026081-1|BAB15354.1| 566|Homo sapiens protein ( Homo sapiens ... 28 6.0
AF158642-1|AAD55253.1| 88|Homo sapiens metalloproteinase-disin... 28 6.0
AF158637-1|AAD55251.1| 867|Homo sapiens metalloproteinase-disin... 28 6.0
AF155382-1|AAF73289.1| 906|Homo sapiens metalloprotease-like, d... 28 6.0
AF155381-1|AAF73288.1| 899|Homo sapiens metalloprotease-like, d... 28 6.0
AF073291-1|AAF22476.2| 870|Homo sapiens MDC2 protein. 28 6.0
AB009671-2|BAA32350.1| 823|Homo sapiens MDC2 beta protein. 28 6.0
AB009671-1|BAA32349.1| 859|Homo sapiens MDC2 alpha protein. 28 6.0
AK124996-1|BAC86018.1| 137|Homo sapiens protein ( Homo sapiens ... 24 6.7
X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta pr... 28 8.0
U69263-1|AAC51260.2| 956|Homo sapiens matrilin-2 precursor prot... 28 8.0
DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta ... 28 8.0
DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta ... 28 8.0
DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta ... 28 8.0
BC024181-1|AAH24181.1| 323|Homo sapiens ESR2 protein protein. 28 8.0
AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER... 28 8.0
AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein. 28 8.0
AF124790-1|AAD32580.1| 323|Homo sapiens estrogen receptor beta2... 28 8.0
AF074599-1|AAC25603.1| 381|Homo sapiens estrogen receptor beta ... 28 8.0
AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta ... 28 8.0
AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2... 28 8.0
AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta ... 28 8.0
AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER... 28 8.0
AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta ... 28 8.0
AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta ... 28 8.0
>X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of
human mitochondrial ATP protein.
Length = 136
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 99 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 257
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 258 XXXXXXXXXXXXXXFGSLIIGYAR 329
FGSLIIGYAR
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYAR 99
>D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 136
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 99 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 257
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 258 XXXXXXXXXXXXXXFGSLIIGYAR 329
FGSLIIGYAR
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYAR 99
>CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein.
Length = 136
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 99 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 257
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 258 XXXXXXXXXXXXXXFGSLIIGYAR 329
FGSLIIGYAR
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYAR 99
>BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit c
(subunit 9), protein.
Length = 136
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 99 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 257
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 258 XXXXXXXXXXXXXXFGSLIIGYAR 329
FGSLIIGYAR
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYAR 99
>BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C1
(subunit 9) protein.
Length = 136
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 99 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 257
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 258 XXXXXXXXXXXXXXFGSLIIGYAR 329
FGSLIIGYAR
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYAR 99
>X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene for
mitochondrial ATP synthase c subunit (P2 form). ).
Length = 141
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +3
Query: 168 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
T L + RSFQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
>D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 141
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +3
Query: 168 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
T L + RSFQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
>BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein.
Length = 141
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +3
Query: 168 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
T L + RSFQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
>U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthase
subunit 9 precursor protein.
Length = 142
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 186 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
R FQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 105
>M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein.
Length = 100
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +3
Query: 165 PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
P Q+ A R FQT+ V++DID+AAKF FGSLIIGYAR
Sbjct: 10 PLQV-ARRGFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 63
>CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein.
Length = 142
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 186 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
R FQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 105
>BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C3
(subunit 9) protein.
Length = 142
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 186 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
R FQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 105
>AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein.
Length = 142
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 186 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
R FQT+++++DID+AAKF FGSLIIGYAR
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 105
>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
Length = 4186
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 329 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 189
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 2556 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2604
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = -3
Query: 326 GIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHL 147
GIA EG CS CRC FG+ + R GP C+ELC +
Sbjct: 76 GIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELCSCHPHGQ 133
Query: 146 C--MGGYC-C---KWSHQCRVAEDGRPGCRGDQSG 60
C + G C C +W +C A + G +SG
Sbjct: 134 CEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSG 168
>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
protein.
Length = 3312
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 329 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 189
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 2486 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2534
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = -3
Query: 326 GIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHL 147
GIA EG CS CRC FG+ + R GP C+ELC +
Sbjct: 76 GIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELCSCHPHGQ 133
Query: 146 C--MGGYC-C---KWSHQCRVAEDGRPGCRGDQSG 60
C + G C C +W +C A + G +SG
Sbjct: 134 CEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSG 168
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = -3
Query: 326 GIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHL 147
GIA EG CS CRC FG+ + R GP C+ELC +
Sbjct: 76 GIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELCSCHPHGQ 133
Query: 146 C--MGGYC-C---KWSHQCRVAEDGRPGCRGDQSG 60
C + G C C +W +C A + G +SG
Sbjct: 134 CEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSG 168
>AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.
Length = 1364
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 329 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 189
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 538 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 586
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 31.9 bits (69), Expect = 0.49
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Frame = -3
Query: 329 PGIADDEGAEDCSNTSSGTS-YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 153
PG A E C + G HC C + + G GPHC LC Y
Sbjct: 384 PGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPDTY 443
Query: 152 HL-CMGGYCCKWSHQCRVAEDGRPGCR-GDQSG 60
+ C C+ + C DG C+ G Q G
Sbjct: 444 GVNCSARCSCENAIACSPI-DGECVCKEGWQRG 475
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -3
Query: 329 PGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 153
PG D+ + +C+ G C C + + + V S GL+ P+C + C Y
Sbjct: 124 PGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCTPGYY 183
Query: 152 HLCMGGYCCKWSHQCRVA 99
G C++ QC A
Sbjct: 184 -----GPACQFRCQCHGA 196
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -3
Query: 200 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 66
G GP+C + CR GG C +++ QCR A PG GD+
Sbjct: 266 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 301
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 31.9 bits (69), Expect = 0.49
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Frame = -3
Query: 329 PGIADDEGAEDCSNTSSGTS-YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 153
PG A E C + G HC C + + G GPHC LC Y
Sbjct: 384 PGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPDTY 443
Query: 152 HL-CMGGYCCKWSHQCRVAEDGRPGCR-GDQSG 60
+ C C+ + C DG C+ G Q G
Sbjct: 444 GVNCSARCSCENAIACSPI-DGECVCKEGWQRG 475
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -3
Query: 329 PGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 153
PG D+ + +C+ G C C + + + V S GL+ P+C + C Y
Sbjct: 124 PGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCTPGYY 183
Query: 152 HLCMGGYCCKWSHQCRVA 99
G C++ QC A
Sbjct: 184 -----GPACQFRCQCHGA 196
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -3
Query: 200 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 66
G GP+C + CR GG C +++ QCR A PG GD+
Sbjct: 266 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 301
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens
cDNA FLJ16233 fis, clone FEBRA2028256, moderately
similar to FIBRILLIN 2 PRECURSOR. ).
Length = 872
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 484 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 537
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 538 PRGYLLEEDGRTCKDLDECTSRQH 561
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2385 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2438
Query: 119 SHQCRVAEDGRPGCRGDQSGGRQH 48
+ EDGR D+ RQH
Sbjct: 2439 PRGYLLEEDGRTCKDLDECTSRQH 2462
>BC094778-1|AAH94778.1| 468|Homo sapiens midnolin protein.
Length = 468
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 163 SLHSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMP 327
+LH + Q RP R + T+ + N L+ R ++ + P L + A S A P
Sbjct: 287 TLHPNCQDSSGRPRRDIGTILQILNDLLSATRHYQGMPPSLAQLRCHAQCSPASP 341
>AK098809-1|BAC05419.1| 320|Homo sapiens protein ( Homo sapiens
cDNA FLJ25943 fis, clone JTH10559. ).
Length = 320
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -3
Query: 200 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 66
G GP+C + CR GG C +++ QCR A PG GD+
Sbjct: 67 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 102
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = -3
Query: 329 PGIADDEGAEDCSNTSSGTS-YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSR 156
PG A E C + G HC C + + G GPHC LC R
Sbjct: 185 PGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPPR 243
>L07868-1|AAB59446.1| 1308|Homo sapiens receptor tyrosine kinase
protein.
Length = 1308
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -3
Query: 323 IADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVN-VLSDRCGLEGPHCRELCR--DSRY 153
I D+ AE+C T+ G +H C+S +G + LS R G C E C D +
Sbjct: 487 IRDNRKAENC--TAEGMVCNHL-CSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEF 543
Query: 152 H-LCMGGYCCKWSHQCRVAEDGRPGCRG 72
G C + QC EDG C G
Sbjct: 544 REFENGSICVECDPQCEKMEDGLLTCHG 571
>DQ012014-1|AAY59750.1| 62|Homo sapiens beta-defensin 110 protein.
Length = 62
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 209 DRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRV 102
+RC C+ C D Y GYC KW QC V
Sbjct: 30 ERCEKVRGICKTFCDDVEYDY---GYCIKWRSQCCV 62
>BC130578-1|AAI30579.1| 1935|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 9 protein.
Length = 1935
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 209 DRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
D LE +C+ L + + C GG C KW
Sbjct: 1472 DGSHLESDYCKHLAKPHGHRKCRGGRCPKW 1501
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 254 CTSTNEFGS--RVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSH 114
C+ST GS RV V D G C E + C G C +W++
Sbjct: 1340 CSSTCAGGSQRRVVVCQDENGYTANDCVERIKPDEQRACESGPCPQWAY 1388
>BC112199-1|AAI12200.1| 1308|Homo sapiens v-erb-a erythroblastic
leukemia viral oncogene homolog 4 (avian) protein.
Length = 1308
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -3
Query: 323 IADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVN-VLSDRCGLEGPHCRELCR--DSRY 153
I D+ AE+C T+ G +H C+S +G + LS R G C E C D +
Sbjct: 487 IRDNRKAENC--TAEGMVCNHL-CSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEF 543
Query: 152 H-LCMGGYCCKWSHQCRVAEDGRPGCRG 72
G C + QC EDG C G
Sbjct: 544 REFENGSICVECDPQCEKMEDGLLTCHG 571
>AF488803-1|AAO15765.1| 1935|Homo sapiens a disintegrin-like and
metalloprotease with thrombospondin type 1 motifs 9B
protein.
Length = 1935
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 209 DRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
D LE +C+ L + + C GG C KW
Sbjct: 1472 DGSHLESDYCKHLAKPHGHRKCRGGRCPKW 1501
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 254 CTSTNEFGS--RVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSH 114
C+ST GS RV V D G C E + C G C +W++
Sbjct: 1340 CSSTCAGGSQRRVVVCQDENGYTANDCVERIKPDEQRACESGPCPQWAY 1388
>AC105921-1|AAY24303.1| 552|Homo sapiens unknown protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -3
Query: 323 IADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVN-VLSDRCGLEGPHCRELCR--DSRY 153
I D+ AE+C T+ G +H C+S +G + LS R G C E C D +
Sbjct: 346 IRDNRKAENC--TAEGMVCNHL-CSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEF 402
Query: 152 H-LCMGGYCCKWSHQCRVAEDGRPGCRG 72
G C + QC EDG C G
Sbjct: 403 REFENGSICVECDPQCEKMEDGLLTCHG 430
>AB209697-1|BAD92934.1| 892|Homo sapiens v-erb-a erythroblastic
leukemia viral oncogene homolog 4 variant protein.
Length = 892
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -3
Query: 323 IADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVN-VLSDRCGLEGPHCRELCR--DSRY 153
I D+ AE+C T+ G +H C+S +G + LS R G C E C D +
Sbjct: 87 IRDNRKAENC--TAEGMVCNHL-CSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEF 143
Query: 152 H-LCMGGYCCKWSHQCRVAEDGRPGCRG 72
G C + QC EDG C G
Sbjct: 144 REFENGSICVECDPQCEKMEDGLLTCHG 171
>AB037733-1|BAA92550.1| 1471|Homo sapiens KIAA1312 protein protein.
Length = 1471
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 209 DRCGLEGPHCRELCRDSRYHLCMGGYCCKW 120
D LE +C+ L + + C GG C KW
Sbjct: 1314 DGSHLESDYCKHLAKPHGHRKCRGGRCPKW 1343
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 254 CTSTNEFGS--RVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSH 114
C+ST GS RV V D G C E + C G C +W++
Sbjct: 1182 CSSTCAGGSQRRVVVCQDENGYTANDCVERIKPDEQRACESGPCPQWAY 1230
>BC012915-1|AAH12915.1| 524|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AL365187-6|CAI13527.1| 524|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AL365187-4|CAI13525.1| 184|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 184
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AL365187-3|CAI13523.1| 255|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 255
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AL365187-2|CAI13524.1| 253|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 253
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AL365187-1|CAI13522.1| 326|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 326
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AL109845-2|CAI22239.1| 524|Homo sapiens OMA1 homolog, zinc
metallopeptidase (S. cerevisiae) protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>AB048348-1|BAC79381.1| 524|Homo sapiens metalloprtease related
protein-1 protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 96 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTT 203
F L++ + AVP+ + + P P + A+R+F T+
Sbjct: 104 FSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTS 139
>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 314 DEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRC----GLEGPHCRELCRD 162
D A + +SGT C C + + FG N + +C G G C E C++
Sbjct: 1066 DRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSE-CQE 1119
>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 314 DEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRC----GLEGPHCRELCRD 162
D A + +SGT C C + + FG N + +C G G C E C++
Sbjct: 1066 DRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSE-CQE 1119
>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 314 DEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRC----GLEGPHCRELCRD 162
D A + +SGT C C + + FG N + +C G G C E C++
Sbjct: 1066 DRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSE-CQE 1119
>BC125118-1|AAI25119.1| 870|Homo sapiens ADAM metallopeptidase
domain 22 protein.
Length = 870
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 466 CVLEGAECCKKCTLTQDSQCSDGLCCK 492
>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
Length = 1786
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 314 DEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRC----GLEGPHCRELCRD 162
D A + +SGT C C + + FG N + +C G G C E C++
Sbjct: 1066 DRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSE-CQE 1119
>BC026018-1|AAH26018.2| 1083|Homo sapiens LAMB1 protein protein.
Length = 1083
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 314 DEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRC----GLEGPHCRELCRD 162
D A + +SGT C C + + FG N + +C G G C E C++
Sbjct: 363 DRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSE-CQE 416
>BC014297-1|AAH14297.1| 566|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 123 VVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRR 25
V+A CR+WQ + +WR+ + +Y+V R
Sbjct: 26 VLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
>BC014130-1|AAH14130.1| 566|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 123 VVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRR 25
V+A CR+WQ + +WR+ + +Y+V R
Sbjct: 26 VLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
>AL807752-5|CAI12746.1| 129|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 129
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 123 VVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRR 25
V+A CR+WQ + +WR+ + +Y+V R
Sbjct: 26 VLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
>AL807752-4|CAI12744.1| 200|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 200
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 123 VVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRR 25
V+A CR+WQ + +WR+ + +Y+V R
Sbjct: 26 VLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
>AL807752-3|CAI12743.1| 566|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 123 VVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRR 25
V+A CR+WQ + +WR+ + +Y+V R
Sbjct: 26 VLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
>AK026081-1|BAB15354.1| 566|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22428 fis, clone HRC09055. ).
Length = 566
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 123 VVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRR 25
V+A CR+WQ + +WR+ + +Y+V R
Sbjct: 26 VLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
>AF158642-1|AAD55253.1| 88|Homo sapiens
metalloproteinase-disintegrin protein.
Length = 88
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 59 CVLEGAECCKKCTLTQDSQCSDGLCCK 85
>AF158637-1|AAD55251.1| 867|Homo sapiens
metalloproteinase-disintegrin ADAM22-3 protein.
Length = 867
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 427 CVLEGAECCKKCTLTQDSQCSDGLCCK 453
>AF155382-1|AAF73289.1| 906|Homo sapiens metalloprotease-like,
disintegrin-like, cysteine-rich protein 2 epsilon
protein.
Length = 906
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 466 CVLEGAECCKKCTLTQDSQCSDGLCCK 492
>AF155381-1|AAF73288.1| 899|Homo sapiens metalloprotease-like,
disintegrin-like, cysteine-rich protein 2 delta protein.
Length = 899
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 466 CVLEGAECCKKCTLTQDSQCSDGLCCK 492
>AF073291-1|AAF22476.2| 870|Homo sapiens MDC2 protein.
Length = 870
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 466 CVLEGAECCKKCTLTQDSQCSDGLCCK 492
>AB009671-2|BAA32350.1| 823|Homo sapiens MDC2 beta protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 466 CVLEGAECCKKCTLTQDSQCSDGLCCK 492
>AB009671-1|BAA32349.1| 859|Homo sapiens MDC2 alpha protein.
Length = 859
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 203 CGLEGPHCRELCRDSRYHLCMGGYCCK 123
C LEG C + C ++ C G CCK
Sbjct: 466 CVLEGAECCKKCTLTQDSQCSDGLCCK 492
>AK124996-1|BAC86018.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ43006 fis, clone BRTHA2013707. ).
Length = 137
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 70 SPLQPGLPSSATLHWCDH--LQQYPP 141
SP + + + WCDH LQ PP
Sbjct: 102 SPTESRFVAQTVVQWCDHGSLQSPPP 127
Score = 22.6 bits (46), Expect(2) = 6.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 1 LLGVLCCRAPHLIKTKCCLPPD*SPLQPGLP 93
L G +P ++T C+PP +PL P
Sbjct: 50 LRGETNAHSPEEMRTHFCMPPSPTPLPLAQP 80
>X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta
protein.
Length = 477
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 130 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 170
>U69263-1|AAC51260.2| 956|Homo sapiens matrilin-2 precursor
protein.
Length = 956
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = -3
Query: 254 CTSTNEFGSRVNVLSDRCGLEGPHCR--ELCRDSRY---HLCMGG---YCCKWSHQCRVA 99
C ++++ + ++ R +G CR ++C+ + + H+C+ Y CK S +A
Sbjct: 581 CVNSDDSYTCECLVGFRLAEDGKRCRRKDVCKSTHHGCEHICVNNGNSYICKCSEGFVLA 640
Query: 98 EDGR 87
EDGR
Sbjct: 641 EDGR 644
>DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta
isoform 5 protein.
Length = 472
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta
isoform 4 protein.
Length = 481
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta 4
protein.
Length = 474
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>BC024181-1|AAH24181.1| 323|Homo sapiens ESR2 protein protein.
Length = 323
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER
beta) protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AF124790-1|AAD32580.1| 323|Homo sapiens estrogen receptor beta2
splice variant protein.
Length = 323
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AF074599-1|AAC25603.1| 381|Homo sapiens estrogen receptor beta
isoform 5/6 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 125 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 165
>AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta 3
isoform protein.
Length = 513
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2
splice variant protein.
Length = 495
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta
protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER
beta) variant protein.
Length = 504
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 215 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 255
>AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta
protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
>AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta cx
protein.
Length = 495
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQR 12
Y C ++QC + ++ R C+ + ++CG+R++R
Sbjct: 183 YICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER 223
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,120,867
Number of Sequences: 237096
Number of extensions: 1332073
Number of successful extensions: 4536
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 4172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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