Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2066
(331 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 37 0.003
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 37 0.003
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 37 0.003
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 31 0.20
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 1.0
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 1.0
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 29 1.0
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 1.4
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 1.4
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 2.4
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 2.4
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 27 3.2
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 27 3.2
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 27 3.2
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 27 3.2
U23139-2|AAL02483.1| 460|Caenorhabditis elegans Hypothetical pr... 27 3.2
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 27 3.2
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 27 3.2
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 27 3.2
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 27 3.2
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 4.2
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 4.2
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 26 5.5
U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone... 26 5.5
U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone... 26 5.5
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 7.3
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 26 7.3
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 26 7.3
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 25 9.7
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 25 9.7
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 25 9.7
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 25 9.7
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3
Query: 180 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
A R TT KDIDSAAK+ FG+L+IGYAR
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYAR 55
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3
Query: 180 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
A R TT KDIDSAAK+ FG+L+IGYAR
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYAR 55
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3
Query: 180 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYAR 329
A R TT KDIDSAAK+ FG+L+IGYAR
Sbjct: 30 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYAR 79
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 31.1 bits (67), Expect = 0.20
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = -3
Query: 296 CSNTS-SGTSYSHCRCTSTN-EFGSRVNVLSDRCGLEGPHCR---ELCRDSRYHLCMGGY 132
CS+ + S SHC T + RV ++ C P CR +LC SRY M Y
Sbjct: 296 CSHPAFSEVMASHCSLTCGRCDEVERVEEGTEDCEDMTPDCRNYRDLCEHSRYKTLMENY 355
Query: 131 CCKWSHQC 108
C K C
Sbjct: 356 CPKACGHC 363
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 107 CTGATTCSSTHPYTDGTCCPYTALCSAVLP 196
C+ C + D CCPY + C A P
Sbjct: 189 CSATKPCPNGFSCNDKKCCPYASACPAGAP 218
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 47 NAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYT 172
N C P + C+ T C+S + +G CCP T
Sbjct: 106 NTQCGSNSSPQVSASGQVVTCSTNTQCASGYTCNNGACCPNT 147
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = -3
Query: 296 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWS 117
C S+ +Y C T+T + GS + G + C + + + C G CC +
Sbjct: 90 CQYASTYNNYICCYSTNT-QCGSNSSPQVSASG-QVVTCSTNTQCASGYTCNNGACCPNT 147
Query: 116 HQCRVAEDGRPGCRGDQS 63
+ + +G GC Q+
Sbjct: 148 NSNTCSSNGNNGCLAGQT 165
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 152 HLCMGGYCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQRT 9
++C G CC ++ + G P G S G Q F + G R QR+
Sbjct: 103 YICSNGACCPNTNSNTCSTTGTPCFTGQISVGGQCFNSVNIGDRCQRS 150
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 44 QNAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYT 172
QN C P + C + C+S + ++G CCP T
Sbjct: 72 QNTQCGTNSSPQVSASGQVVTCFTNSQCASGYICSNGACCPNT 114
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -3
Query: 326 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 150
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 149 LCMGGYCCKWSHQC 108
G C+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -3
Query: 326 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 150
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 149 LCMGGYCCKWSHQC 108
G C+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 98 LQLCTGATTCSSTHPYTDGTCCPYTA 175
+Q C+G C TH + CCP A
Sbjct: 373 VQRCSGKEHCPETHDCKNTVCCPKPA 398
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 107 CTGATTCSSTHPYTDGTCC-PYTALCSAVLPDHIGH*GH*LCCQIHWCWCSDSGSS 271
C T+C + P++ G CC +C A G+ C + C G S
Sbjct: 797 CPSTTSCYAPTPFSSGLCCASIDEVCPATFIYEEEKSGNEQCSPLEKNTCGQDGQS 852
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -3
Query: 296 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 168
C NT TS S+C C + S + L P C++ C
Sbjct: 51 CHNTQQSTSASNCNCVLKSNSKSVPVTIKVSTKLCAPACQQSC 93
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 53 VCRQT-DRPCSQVCHLLQLCTGATT---CSSTHPYTDGTCC 163
+C+QT C Q ++ C +++ CSS + G+CC
Sbjct: 330 ICQQTCQNTCQQAAQIVVPCQSSSSGCGCSSGYSQCGGSCC 370
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 172 CVGTAGTICVWVGTAASG-RTSAELQK 95
CVG GT+C + +G +TS +LQK
Sbjct: 375 CVGVLGTVCDVIQLGVTGSKTSPDLQK 401
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 172 CVGTAGTICVWVGTAASG-RTSAELQK 95
CVG GT+C + +G +TS +LQK
Sbjct: 416 CVGVLGTVCDVIQLGVTGSKTSPDLQK 442
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 172 CVGTAGTICVWVGTAASG-RTSAELQK 95
CVG GT+C + +G +TS +LQK
Sbjct: 375 CVGVLGTVCDVIQLGVTGSKTSPDLQK 401
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 172 CVGTAGTICVWVGTAASG-RTSAELQK 95
CVG GT+C + +G +TS +LQK
Sbjct: 416 CVGVLGTVCDVIQLGVTGSKTSPDLQK 442
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 242 WCWCSDSGSSWFRSWYWNSLRLPHH 316
WC + S SSW + W + L HH
Sbjct: 19 WCNMNISQSSWIKCRDWMAFALSHH 43
>U23139-2|AAL02483.1| 460|Caenorhabditis elegans Hypothetical
protein F13H8.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 136 PPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNS 240
PP+ YL ++ +S C PSR R LR + +S
Sbjct: 368 PPVECPYLRTIQNSENCEPSREMRFLRVPSAFASS 402
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCR 75
Y C++S +CR+ + GR CR
Sbjct: 87 YVCRYSKKCRIDKAGRNVCR 106
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 242 WCWCSDSGSSWFRSWYWNSLRLPHH 316
WC + S SSW + W + L HH
Sbjct: 19 WCNMNISQSSWIKCRDWMAFALSHH 43
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCR 75
Y C++S +CR+ + GR CR
Sbjct: 87 YVCRYSKKCRIDKAGRNVCR 106
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCR 75
Y C++S +CR+ + GR CR
Sbjct: 87 YVCRYSKKCRIDKAGRNVCR 106
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 104 LCTGATTCSSTHPYTDGTCCPYTALC 181
LC TTC D CP ALC
Sbjct: 575 LCANGTTCREDRVKCDKRPCPIRALC 600
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 149 LCMGGYCCKWSHQCRVAEDGRPGCRGDQS 63
LC G CC WS C + + C G QS
Sbjct: 698 LCEGQSCCNWSEWCHWSMCDKE-CGGGQS 725
>Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical
protein ZK643.6 protein.
Length = 180
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -3
Query: 308 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLC----M 141
G ++C++ ++ SY+ RC S E+ S ++ L C C +C D+ +C
Sbjct: 103 GTQECTDLANDCSYNQNRC-SVKEYSSLMHRL---CPKTCNAC-NICEDAN-KMCPIWVP 156
Query: 140 GGYCCKWSH 114
G+C K+ H
Sbjct: 157 RGFCSKFDH 165
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 140 PYTDGTCCPYTALC 181
P+T GTCCP T C
Sbjct: 52 PFTGGTCCPGTNHC 65
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 26.2 bits (55), Expect = 5.5
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Frame = -3
Query: 308 GAEDCSNTSSGTSYSHC-------RC----TSTNEFGSRVNVLSDRC--GLEGPHCRELC 168
G E C TSSG HC C S F + N +C G G +C +L
Sbjct: 1704 GDEICDCTSSGWLGDHCEIQPKLDNCLYCQNSVKCFDTFTNYSRCQCAPGFSGDYCSDLI 1763
Query: 167 RDSRYHLCMGGYCC 126
D + C G C
Sbjct: 1764 DDCFFEPCFNGGTC 1777
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 122 TCSSTHPYTDGTCCPYTALCSAVLPDHIG 208
+CS + + GTC Y A C A LP G
Sbjct: 1964 SCSDINCFNGGTCIDYNATC-ACLPGTTG 1991
>U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform b protein.
Length = 434
Score = 26.2 bits (55), Expect = 5.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCR 75
Y C+++ QC + +D R CR
Sbjct: 54 YTCRFNKQCNIDKDHRNACR 73
>U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform a protein.
Length = 435
Score = 26.2 bits (55), Expect = 5.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCR 75
Y C+++ QC + +D R CR
Sbjct: 54 YTCRFNKQCNIDKDHRNACR 73
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +2
Query: 86 VCHLLQLCTGATTCSSTHPYTD--GTCCPYTA-LCS 184
VC Q+C G C+S + + CCP A +CS
Sbjct: 743 VCSTTQVCPGTHECTSVNSGSSVVNRCCPTRAYICS 778
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 71 RPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYTALC 181
+PC CHL+ G+ + + DGT C + A C
Sbjct: 645 QPCRVWCHLI----GSELIRNKGQFPDGTPCGFDAYC 677
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 71 RPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYTALC 181
+PC CHL+ G+ + + DGT C + A C
Sbjct: 645 QPCRVWCHLI----GSELIRNKGQFPDGTPCGFDAYC 677
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 25.8 bits (54), Expect = 7.3
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 11/57 (19%)
Frame = +2
Query: 53 VCRQTDRPC----SQVCHLLQLCTGATTC-------SSTHPYTDGTCCPYTALCSAV 190
+C+Q P C + + CTG TC H DG C P A S V
Sbjct: 1426 ICKQKSAPAFAAPGDTCSMREKCTGGATCFEGMCTCDDHHFAEDGYCRPIEARSSKV 1482
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 71 RPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYTALC 181
+PC CHL+ G+ + + DGT C + A C
Sbjct: 645 QPCRVWCHLI----GSELIRNKGQFPDGTPCGFDAYC 677
>Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical
protein R10D12.2 protein.
Length = 408
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 134 YCCKWSHQCRVAEDGRPGCR 75
Y CK S+ C V+ R GCR
Sbjct: 88 YVCKQSNNCIVSHAVRSGCR 107
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
R09H10.5 protein.
Length = 1603
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 299 DCSNTSSGTSYSHCRCTSTNEFGS 228
DC N+++ +Y C+C N FG+
Sbjct: 1546 DCMNSATVDTYGFCQC-DANHFGN 1568
>Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical
protein ZK673.1 protein.
Length = 154
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 110 TGATTCSSTHPYTDGTCCPYTALCS 184
+GATT S+ + C YT+LCS
Sbjct: 59 SGATTASTCADDPNTDCTQYTSLCS 83
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 314 DEGAEDCSNTSSGTSYSHCRCTSTNE 237
+EG E+CS T + Y+ CT T +
Sbjct: 137 NEGKEECSTTDNIHRYTFKMCTPTQD 162
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 308 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 207
G+ + S TSS S S TST EF + + V D
Sbjct: 113 GSTEVSITSSSPSPSSSSSTSTGEFKTTITVDDD 146
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 308 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 207
G+ + S TSS S S TST EF + + V D
Sbjct: 292 GSTEVSITSSSPSPSSSSSTSTGEFKTTITVDDD 325
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 308 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 207
G+ + S TSS S S TST EF + + V D
Sbjct: 260 GSTEVSITSSSPSPSSSSSTSTGEFKTTITVDDD 293
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,253,360
Number of Sequences: 27780
Number of extensions: 183270
Number of successful extensions: 774
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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