Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2064
         (520 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030413-1|ABO52833.1|  314|Drosophila melanogaster IP10008p pro...    33   0.18 
AE014297-1346|AAN13523.1|  267|Drosophila melanogaster CG32852-P...    33   0.18 
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece...    29   2.9  
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ...    29   2.9  
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC...    29   2.9  
AY119538-1|AAM50192.1|  769|Drosophila melanogaster GH22104p pro...    29   5.0  

>BT030413-1|ABO52833.1|  314|Drosophila melanogaster IP10008p
           protein.
          Length = 314

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +3

Query: 48  TATHREAQLAATHGP----CRAASGPRCLCSSRSSAPAPGHRRDSPCC 179
           + TH+EA   ATH       RA   P  LCSS S+A AP  RR+   C
Sbjct: 129 SVTHKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPRRREFYFC 176


>AE014297-1346|AAN13523.1|  267|Drosophila melanogaster CG32852-PA
           protein.
          Length = 267

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +3

Query: 48  TATHREAQLAATHGP----CRAASGPRCLCSSRSSAPAPGHRRDSPCC 179
           + TH+EA   ATH       RA   P  LCSS S+A AP  RR+   C
Sbjct: 129 SVTHKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPRRREFYFC 176


>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
           receptor 4 protein.
          Length = 1518

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 198 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCGALRSRI 25
           LR +GV      G VQ P+P  + S  S+        +  PR  P  + G  CG +R+ +
Sbjct: 669 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG-VRTMV 727

Query: 24  YAH 16
           + +
Sbjct: 728 WGY 730


>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
           protein.
          Length = 1464

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 198 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCGALRSRI 25
           LR +GV      G VQ P+P  + S  S+        +  PR  P  + G  CG +R+ +
Sbjct: 614 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG-VRTMV 672

Query: 24  YAH 16
           + +
Sbjct: 673 WGY 675


>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
           protein.
          Length = 1518

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 198 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCGALRSRI 25
           LR +GV      G VQ P+P  + S  S+        +  PR  P  + G  CG +R+ +
Sbjct: 669 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG-VRTMV 727

Query: 24  YAH 16
           + +
Sbjct: 728 WGY 730


>AY119538-1|AAM50192.1|  769|Drosophila melanogaster GH22104p
           protein.
          Length = 769

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
 Frame = +2

Query: 203 AQETHHLRLLGWDLKLKENKAI---------RSPY---YKECQFFTGRVLHEEGSAVTVT 346
           A ET HL L+     L  N  +         RSP    +  C F  G+V  +  + V ++
Sbjct: 100 ANETLHLELMAHSYFLAPNLVVERHRRDLRTRSPLTTRHLNCHFH-GKVRGQPATNVAIS 158

Query: 347 ECDGQLYGLLQVGGEEFVLQPTR 415
            C G L G ++  G E+ ++P++
Sbjct: 159 TCAG-LVGHIRTAGNEYFIEPSK 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,066,868
Number of Sequences: 53049
Number of extensions: 440794
Number of successful extensions: 1780
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)