Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2060
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    25   1.3  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   5.2  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     22   9.1  

>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 45  KRICRCLHKIKKKVYIN 95
           KR+C    K++KKV+IN
Sbjct: 56  KRLCHIRGKLRKKVWIN 72


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 58  VAYIKLKKKCTLIVASDIS-SWNLDSRAFL 144
           V  +K+K+KC  +V+ D+S +++   R FL
Sbjct: 574 VVDLKMKRKCGKLVSFDLSQAFDRVDRGFL 603


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 143 RKARESRFQLEMSEATINVHFFFNFM*ATAYAFLILFRFSS 21
           RKA  S     +   TI +   F ++ A   AFL+L  + S
Sbjct: 48  RKALRSPPSYRIGNRTIRLQVHFTWVLAALCAFLLLVLYIS 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,753
Number of Sequences: 2352
Number of extensions: 7489
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)