Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2057
         (476 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q91G04 Cluster: 135R; n=1; Invertebrate iridescent viru...    33   3.3  
UniRef50_Q0U0T9 Cluster: Predicted protein; n=2; cellular organi...    33   4.3  
UniRef50_Q3U0N9 Cluster: Activated spleen cDNA, RIKEN full-lengt...    32   5.7  
UniRef50_Q4YBY5 Cluster: Putative uncharacterized protein; n=1; ...    32   7.5  
UniRef50_Q34937 Cluster: MURF2 protein; n=9; Trypanosomatidae|Re...    32   7.5  
UniRef50_Q8I370 Cluster: Putative uncharacterized protein PFI039...    31   10.0 

>UniRef50_Q91G04 Cluster: 135R; n=1; Invertebrate iridescent virus
           6|Rep: 135R - Chilo iridescent virus (CIV) (Insect
           iridescent virus type 6)
          Length = 71

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 188 ISRLRLSRFPTFNPFHLYFILKVFHSYCCNFIK-KTCIFYFVSCFIYIFSVV*FTSVC 18
           +++   SRF  F+ F  +  +  F +    FI  K  IF FV+ F YIF+   FTS+C
Sbjct: 1   MTKFTFSRFVIFSLFFTFISVSTFGNINFRFIVCKWTIFSFVALF-YIFTHTSFTSLC 57


>UniRef50_Q0U0T9 Cluster: Predicted protein; n=2; cellular
           organisms|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 55

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 253 YNKI*YTHFTLYMNYSNSYGYINCYNPHDEL 345
           YN   Y ++  Y NY N Y Y N YN H+ L
Sbjct: 21  YNYYNYYNYYNYCNYYNYYNYCNYYNYHNNL 51


>UniRef50_Q3U0N9 Cluster: Activated spleen cDNA, RIKEN full-length
           enriched library, clone:F830043A20 product:hypothetical
           Tyrosine-rich region profile containing protein, full
           insert sequence; n=1; Mus musculus|Rep: Activated spleen
           cDNA, RIKEN full-length enriched library,
           clone:F830043A20 product:hypothetical Tyrosine-rich
           region profile containing protein, full insert sequence
           - Mus musculus (Mouse)
          Length = 225

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -2

Query: 418 SRCLLASFVQIPSASGTKDVV-T*FTAHHVDCNSLCSRNCYYSSYKA*NVYIIFCYIFIM 242
           +RC+L +   +    GT  ++ T +T H V C   C R   Y+ Y   +VY   C +++M
Sbjct: 147 TRCILYTMYTVHHVYGTPCILYTMYTVHDVYCTR-CIR---YTVYTVHDVYCTRCILYVM 202

Query: 241 Y 239
           Y
Sbjct: 203 Y 203


>UniRef50_Q4YBY5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 51

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 164 FPTFNPFHLYFILKVFHSYCCN-FIKKTCIFYFVSCFIYIF 45
           F   +PF +Y    +F   C N  +K   +++F  CFI+IF
Sbjct: 5   FKIIHPFIIYIFYLLFIIVCYNRLVKYGLLYFFQFCFIFIF 45


>UniRef50_Q34937 Cluster: MURF2 protein; n=9; Trypanosomatidae|Rep:
           MURF2 protein - Leishmania tarentolae (Sauroleishmania
           tarentolae)
          Length = 355

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 137 YF-ILKVFHSYCCNFIKKTCIFYFVSCFIYIF 45
           YF I+ +F+   C+++   C+FYF+ CFI+ F
Sbjct: 140 YFGIINMFNVIFCSYL--FCLFYFIICFIFCF 169


>UniRef50_Q8I370 Cluster: Putative uncharacterized protein PFI0390c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0390c - Plasmodium falciparum
           (isolate 3D7)
          Length = 383

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 161 PTFNPFHLYFILKVFHSYCCNFIKKTCIFYFVSCFIY 51
           P +N   L   + +F SY C++I   C FYF+  F Y
Sbjct: 335 PNYNIHFLNIPIFIFVSYTCDYIF-FCFFYFIPLFFY 370


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,303,048
Number of Sequences: 1657284
Number of extensions: 8627082
Number of successful extensions: 20791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20748
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)