Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2052
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical pr... 219 1e-57
U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical pr... 219 1e-57
AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical ... 34 0.050
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 31 0.46
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 7.6
U70845-4|AAB09102.1| 340|Caenorhabditis elegans Hypothetical pr... 27 10.0
U39849-5|AAA81048.2| 663|Caenorhabditis elegans Hypothetical pr... 27 10.0
U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical p... 27 10.0
>U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical
protein T22F3.3b protein.
Length = 846
Score = 219 bits (534), Expect = 1e-57
Identities = 100/155 (64%), Positives = 119/155 (76%)
Frame = +2
Query: 32 VQTDAEKRKQISVRGIVAVQNVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 211
+ D ++RKQISVRGI V+NV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 2 ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 61
Query: 212 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQGTVDEALYQXXXXXXXX 391
LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ TVDEALYQ
Sbjct: 62 LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQATVDEALYQLGLDIEEL 121
Query: 392 XXXXXXXXXXXXXXXRLTACFLDSMATLSLAAYGY 496
RL ACFLDSMATL + AYGY
Sbjct: 122 QEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGY 156
>U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical
protein T22F3.3a protein.
Length = 882
Score = 219 bits (534), Expect = 1e-57
Identities = 100/155 (64%), Positives = 119/155 (76%)
Frame = +2
Query: 32 VQTDAEKRKQISVRGIVAVQNVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 211
+ D ++RKQISVRGI V+NV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 38 ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 97
Query: 212 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQGTVDEALYQXXXXXXXX 391
LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ TVDEALYQ
Sbjct: 98 LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQATVDEALYQLGLDIEEL 157
Query: 392 XXXXXXXXXXXXXXXRLTACFLDSMATLSLAAYGY 496
RL ACFLDSMATL + AYGY
Sbjct: 158 QEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGY 192
>AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical
protein T04D1.2 protein.
Length = 381
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +2
Query: 47 EKRKQISVRGIVAVQNVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRW 226
E K SVR +V ++N+++ ++ ++ T V R + TP Y+ + +KD+ +
Sbjct: 96 EHLKTYSVRQLVVIENISDYQEFYDMMWSQTTVSYRFLTTPPVTYW-IRSVIKDYPNMKL 154
Query: 227 IRTQQYYYENDPKRVYYLSLEY 292
YEN + +YL++ Y
Sbjct: 155 NGISYMSYENKKELEHYLNVLY 176
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +2
Query: 89 QNVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRWIRTQQYYYENDPKR 268
Q + + +A R H VK++ + F + T + L +T YY + P +
Sbjct: 51 QKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQ 110
Query: 269 VYYLSLEYYMGRSLQNTMINLGIQGTV 349
+Y +YY R+ + + I GT+
Sbjct: 111 RFYNYYQYYRLRAAPKVDLRIVIVGTI 137
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 279 CPWSTIWGVLFKIP*STLASKVLLTKHYTNLVWILKN*KNLRKM 410
CP + + G K+ S L++K HY NL +LKN L+K+
Sbjct: 1090 CPENKLVGTTNKLI-SDLSNKTKYVIHYKNLKQVLKNGMVLKKI 1132
>U70845-4|AAB09102.1| 340|Caenorhabditis elegans Hypothetical
protein F22H10.5 protein.
Length = 340
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 311 EENAPYSTPRTNSRLS-*DHFHNSIVEYESTWRQDDLSRC 195
++ +P S+PRT S S DH NSI + E ++Q LS+C
Sbjct: 40 KKKSPSSSPRTPSLTSNNDHGRNSIPQEEPAFQQ-LLSKC 78
>U39849-5|AAA81048.2| 663|Caenorhabditis elegans Hypothetical
protein C06A8.1a protein.
Length = 663
Score = 26.6 bits (56), Expect = 10.0
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 QIVDSLRIIFIIVLLSTNPP-GDKMIFHGVCESKIVIPRGRNISIFH*SVMDMTIERLLD 104
++++S I I LST P G + + V E KI + G++ S H ++ IERL+D
Sbjct: 8 KVIESHGTIKKIDSLSTMPYCGVETDENAVVEEKITLESGKSWSPKHYELLHERIERLID 67
>U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical
protein F37A4.1 protein.
Length = 482
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 41 DAEKRKQISVRGIVAVQNVTEVKKAFNRHVHYTLVKDRNVATPRD-YYFALAH 196
D +++ G+ + T+ K+ F+ HY + D N TP D YF + H
Sbjct: 425 DMTPTERLMHSGVSLREESTQRKRLFDACNHYLIDFDANHVTPLDPQYFNIPH 477
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,929,528
Number of Sequences: 27780
Number of extensions: 229965
Number of successful extensions: 670
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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