Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2049
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    31   0.039
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.48 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.6  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   6.0  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   7.9  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 105 KSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAK- 281
           + E+ A+ +D+   +R  +   EH+IRN E   +K  S  D  +A  E    + VA+ + 
Sbjct: 324 QEEQLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEA 383

Query: 282 YDEVAQTLE 308
           Y  V +TL+
Sbjct: 384 YGTVRRTLQ 392


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 522  TEDDLKILDDLYPEVTPKHELNEERQ 599
            T+ +LKILDD+ PE+T +   ++  Q
Sbjct: 1029 TKRELKILDDIMPEMTKRARADDLHQ 1054


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = +3

Query: 219 YRDLQKAGKELNSDQKVAVA------KYDEVAQTLEFARD 320
           +  L  AG+EL+S  KVA+        YD +  TLE   D
Sbjct: 125 FSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSD 164


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 132 PPKRPAFQILH*QLGSAAAEFL 67
           P  RPA + LH  +G +A +FL
Sbjct: 72  PGPRPAVRHLHSSVGKSAPQFL 93


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 243 KELNSDQKVAVAKYDEVAQTLEFARDLSKQVTAI 344
           K L   + V +   DE  +  +  RDL  Q+T +
Sbjct: 343 KSLGQMETVEIRFIDEETEAADVERDLRNQITGL 376


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,016
Number of Sequences: 2352
Number of extensions: 8757
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)