Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2044
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 30 1.4
07_01_1157 + 10954619-10954835,10956078-10957114 29 1.8
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 29 3.1
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 29 3.1
06_03_1296 - 29104857-29105870 28 4.1
03_06_0581 + 34886728-34886817,34886990-34887175,34887332-348875... 28 4.1
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 28 5.5
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 27 7.2
08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099 27 7.2
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206 27 7.2
06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776 27 7.2
05_03_0669 + 16802158-16802495,16802574-16803906,16803970-16804818 27 7.2
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 27 7.2
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 27 7.2
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 27 7.2
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 27 7.2
02_05_0387 - 28535947-28536130,28538615-28538788,28538824-285390... 27 7.2
02_03_0347 - 17999780-18000592,18000656-18003019 27 7.2
02_03_0116 - 15440263-15441024,15441097-15443451 27 7.2
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 27 7.2
01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490... 27 7.2
01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189 27 7.2
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 27 9.6
05_03_0439 + 14028234-14028287,14029394-14029468,14029562-140296... 27 9.6
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 265 SPAVWVVRA*GSRKISRILGHRIRRSSSDWQDGWVA--HPFWYRHSLWGVLSEGVHIAE 95
+PAV V S+KI R++GHR +D+Q ++ + H W V E +H+++
Sbjct: 354 APAVKVTEVLTSKKIQRLVGHRRILQEADFQYQFLVKWQSLSHHHDCW-VPLEWLHVSD 411
>07_01_1157 + 10954619-10954835,10956078-10957114
Length = 417
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 137 MPIPEWVRNPAILPIARAASNSVPKYP 217
MP P ++ P + P+ +AS+ PKYP
Sbjct: 1 MPFPYFLLAPLLTPLPHSASDPQPKYP 27
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +2
Query: 134 GMPIPEWVRNPA 169
G+PIP+WV+NPA
Sbjct: 776 GIPIPDWVKNPA 787
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +2
Query: 134 GMPIPEWVRNPA 169
G+PIP+WV+NPA
Sbjct: 900 GIPIPDWVKNPA 911
>06_03_1296 - 29104857-29105870
Length = 337
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 415 NTGWVSLCMSKLPPLSFHQSVGTLLKCVTSIHYDSPDMYSAN 540
N GW L M++ PLSF + L+ T H D P + S N
Sbjct: 58 NGGW--LLMAQHKPLSFQDQIVFLVHPSTGTHLDLPVLRSPN 97
>03_06_0581 +
34886728-34886817,34886990-34887175,34887332-34887543,
34888161-34888318,34888615-34888773,34888921-34888973,
34889265-34889405,34889788-34889823,34890542-34890776,
34891017-34891144
Length = 465
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = -2
Query: 188 LERLAGWLGCAPILVSA--------FPVGCA*RGRPHRRTDSLGKWLGGVRLGTRGPELP 33
LE+ WL P+ +A PVG G+ RR + GK G+R G P++
Sbjct: 394 LEQPPAWLPPGPLQAAAPAAARGTPSPVGHGLGGQGARRVGNWGKIANGLRCGPIRPQVE 453
Query: 32 RPE*G-WR 12
R E G W+
Sbjct: 454 RKEGGEWK 461
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A + Y D A CP PY
Sbjct: 737 PEWLANPVVVPKANSKLRMCIDY-TDLNKA-CPKDPY 771
>08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 92 PFC-DVDALAKHTPQGMPIPEWVRNP 166
P+C ++ L H G+ IPEW+R+P
Sbjct: 1578 PYCSNLKVLELHGYGGVEIPEWMRDP 1603
>08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099
Length = 621
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 558 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 592
>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
Length = 961
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 730 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 764
>06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776
Length = 833
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 600 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 634
>05_03_0669 + 16802158-16802495,16802574-16803906,16803970-16804818
Length = 839
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 634 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 668
>04_04_1405 -
33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 646 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 680
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 494 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 528
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 848 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 882
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 865 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 899
>02_05_0387 -
28535947-28536130,28538615-28538788,28538824-28539023,
28539090-28539234,28539403-28539509
Length = 269
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 8 LFAILTLAAVALAREYPAGLHPAICPNYPFCDVDALAKHTPQGMPIPEW 154
L ILTL V R G + + ++ CD D + H + P W
Sbjct: 100 LLYILTLGVVESYRNLGIGCYLLVQLSFTVCDYDLINPHKHSRLQHPHW 148
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 865 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 899
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 862 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 896
>01_06_1164 -
35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 857 PEWLANPVVVPKANGKVRMCIDY-TDLNKA-CPKDPY 891
>01_06_0717 -
31446860-31447074,31447183-31447270,31448909-31449012,
31449618-31449745,31450461-31450555,31461823-31463115,
31463188-31464039,31464568-31464621
Length = 942
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 146 PEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 256
PEW+ NP ++P A Y D A CP PY
Sbjct: 379 PEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 413
>01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189
Length = 578
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 2 GKLFAILTLAAVALAREYPAGLHPAICPNYPFCDVDALAKHTPQGMPIPEWV 157
G LF + + AV L+++ P C N F + D +A T EWV
Sbjct: 318 GVLFDTVAIKAVILSKKVPR----VTCMNERFIEQDMMAAGTDSSFTTTEWV 365
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 276 SLCIHQQYG*LGHRAAGKSAGYLGTEFDAARAIGRMAGLRTHSG 145
SL +QQ G A SAGY GT + A+ G +H G
Sbjct: 331 SLESYQQGGVQAETTAAASAGYAGTGHNVAQTSDSYTGDYSHQG 374
>05_03_0439 +
14028234-14028287,14029394-14029468,14029562-14029642,
14029778-14029934,14030056-14030060,14030152-14030226,
14030332-14030457,14030604-14030822,14031293-14031406,
14031498-14031533,14031630-14031764
Length = 358
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 145 YRHSLWGVLSEGVHIAERIVWANGWV-ESGWVLAGQSYRGQSEDG 14
Y+H G++ G H + I W E W+LA Q RG +DG
Sbjct: 274 YKHITGGMM--GGHAVKLIGWGTTDAGEDYWLLANQWNRGWGDDG 316
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,432,087
Number of Sequences: 37544
Number of extensions: 404944
Number of successful extensions: 1226
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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