Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2042
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 55 3e-08
04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910... 54 6e-08
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115... 53 2e-07
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 50 2e-06
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 47 1e-05
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 43 2e-04
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 42 3e-04
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 40 0.002
03_01_0012 - 101584-101898,102274-102531,102932-103474 36 0.021
05_03_0457 + 14274533-14274879,14275575-14275605 35 0.038
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 31 0.46
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 30 1.4
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 28 5.7
01_01_1110 + 8789741-8790616 28 5.7
01_01_0182 - 1561779-1561873,1561977-1562050,1562140-1562207,156... 28 5.7
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 27 7.5
06_01_0494 + 3539804-3539949,3540466-3540826 27 7.5
01_06_0384 + 28906632-28907333 27 7.5
12_02_0325 + 17553387-17553514,17553847-17554003 27 10.0
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 225 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAI-DSSPKTP 398
MRAV G+GG T+K ++ P P++ + E+LI+++A LN D +++G + PK P
Sbjct: 10 MRAVQYGGYGGGAATLKFVEIPVPSLKKNEILIKIEAASLNQADWRIQKGLMRPFHPKFP 69
Query: 399 FILGFECAGEIEQFGAKCHQF 461
FI + +GE+ + G+ H+F
Sbjct: 70 FIPVTDVSGEVIEVGSAIHEF 90
>04_03_0562 +
17190443-17190520,17190715-17190853,17190943-17191034,
17191681-17191989,17192817-17193506
Length = 435
Score = 54.4 bits (125), Expect = 6e-08
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 225 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAI-DSSPKTP 398
MRAV +G+GG +K ++ P P+V + EVL++V+A +N DL+ ++G + PK P
Sbjct: 10 MRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHPKFP 69
Query: 399 FILGFECAGEIEQFGAKCHQF 461
FI +GEI + G+ +F
Sbjct: 70 FIPVNNVSGEIVEVGSAVREF 90
>04_03_0566 +
17209455-17209565,17210159-17210203,17211456-17211569,
17211943-17212081,17212324-17212415,17213245-17213517
Length = 257
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +3
Query: 225 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAI-DSSPKTP 398
MRAV TG+GG +K ++ P P+V + EVLI+V+A +N D +++G + PK P
Sbjct: 74 MRAVQYTGYGGGAGALKHVEIPVPSVKKHEVLIKVEAASVNPIDWSIQKGMLRPFLPKFP 133
Query: 399 FILGFECAGEIEQFGAKCHQ 458
FI + AGEI + G+ H+
Sbjct: 134 FIPVTDVAGEIVEAGSAVHE 153
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 225 MRAVVLTGFGGLKTVKILKKPE--PTVGEGEVLIRVKACGLNFQDLIVRQGAIDSSPKTP 398
MRAVV+ GG + ++ E P GEGEVL+ V A G+N D + RQG + P
Sbjct: 1 MRAVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYPAPPGAS 60
Query: 399 FILGFECAGEIEQFG 443
G EC+G I G
Sbjct: 61 PYPGLECSGTILALG 75
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 228 RAVVLTGFGGLKTVKILKK-PEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDS--SPKTP 398
RAVV+ FGG + +++ + P P + G+VL+R +A +N DL +R G S P P
Sbjct: 31 RAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPVLP 90
Query: 399 FILGFECAGEIEQFGAKCHQF 461
I+G + +GE+ G F
Sbjct: 91 LIIGRDISGEVAATGTSVSSF 111
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 225 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQG-AIDSSP-KT 395
MRAV +GG + +K ++ P PT +GEVLI+++A +N D ++G A P K
Sbjct: 8 MRAVQYDKYGGGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPNKF 67
Query: 396 PFILGFECAGEIEQFGAKCHQF 461
PFI ++ AGE+ + G F
Sbjct: 68 PFIPVYDLAGEVVELGRGVSSF 89
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +3
Query: 225 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSSPKTPFI 404
MR V G T++ + P P GE +LI+ KACG+ DL V +G + S +P +
Sbjct: 50 MRGAVFWEPGRPLTLEDFRMPRPKAGE--LLIKTKACGVCHSDLHVLKGELPFS--SPCV 105
Query: 405 LGFECAGEIEQFG 443
+G E GE+ G
Sbjct: 106 VGHEITGEVVDHG 118
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 225 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAI-DSSP-KT 395
MRAV G+GG + +K ++ P P+ +GEVLI+++A +N D +++G + P K
Sbjct: 14 MRAVQYDGYGGGAEGLKHVEVPIPSPKKGEVLIKMEAASINPIDWKIQKGMLRPFLPWKF 73
Query: 396 PFILGFECAGEIEQFGAKCHQF 461
P I + AG++ G +F
Sbjct: 74 PSIPACDLAGKVAAVGGGVRRF 95
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 35.9 bits (79), Expect = 0.021
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 303 EGEVLIRVKACGLNFQDLIVRQGAIDSSPKTPFILGFECAGEIEQFG 443
EGE+ I+ A G+NF D+ RQG + S+P PF+ G E G + G
Sbjct: 73 EGEIRIKNTAIGVNFIDVYYRQG-VYSAP-LPFVPGREAVGVVTAVG 117
>05_03_0457 + 14274533-14274879,14275575-14275605
Length = 125
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 285 PEPTVGEG-EVLIRVKACGLNFQDLIVRQGAIDSSPKTPFILGFECAGEIEQFGAKCHQF 461
P P + V +RV A LNF + QG P PF+ G + AG ++ G +F
Sbjct: 31 PAPALASPTSVRVRVAATSLNFATYLQVQGKYQERPALPFVPGSDYAGFVDAVGPAVRRF 90
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 31.5 bits (68), Expect = 0.46
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +3
Query: 225 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDS--SPKT 395
MRAV GG +K ++ P P+ + EVL++++A +N D +++G + +
Sbjct: 12 MRAVQYDASGGGAAGLKHVEVPVPSAKKNEVLLKLEAATINPVDWKIQKGMLRPLLPRRL 71
Query: 396 PFILGFECAGEIEQFGAKCHQF 461
PFI + AG + G + F
Sbjct: 72 PFIPVTDVAGVVAGVGPGVNDF 93
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 441 QIARFHQRIRSPR*KESSVKSR 376
Q+ R HQR+ P+ K++SV+SR
Sbjct: 313 QVGRVHQRVEEPKVKQASVQSR 334
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 303 EGEVLIRVKACGLNFQDLIVRQGAIDSSPKTPFI 404
EGE+ I+ KA G+N+ D+ R G + P PF+
Sbjct: 42 EGEIRIKNKAIGVNYVDIYYRTG-LHQEP-LPFV 73
>01_01_1110 + 8789741-8790616
Length = 291
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 494 SGRPTTWSPPLKLVTFCAKLLDFTSAFEAQD 402
S PTT SP ++ C KLL S + AQ+
Sbjct: 131 SNNPTTHSPDQEVCKLCLKLLKERSTWNAQE 161
>01_01_0182 -
1561779-1561873,1561977-1562050,1562140-1562207,
1562279-1562371,1562521-1562604,1562697-1562752,
1562843-1562950,1563051-1563225,1563237-1563422
Length = 312
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 476 WSPPLKLVTFCAKLLDFTSAFEAQDERSLR*R-VDGALTNY 357
WS PL + L +T + +DE S R R V GA+ NY
Sbjct: 101 WSAPLHYIDTPDHLCSYTYDRDCKDEDSFRGRCVAGAINNY 141
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 490 EDPPLGRPL*NW*HFAPNCSIS-PAHSKPKMKGV 392
E+PPL R W FA +C++S P+ S P G+
Sbjct: 1778 EEPPLIRSKYGWFRFAASCTLSTPSVSGPPNAGL 1811
>06_01_0494 + 3539804-3539949,3540466-3540826
Length = 168
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 514 ARPKHGTREDPPLGRPL*NW*HFAPNCSISPAH 416
A +H T P RP +P CSISP H
Sbjct: 42 ALQQHSTSSSSPFSRPRERINEPSPGCSISPPH 74
>01_06_0384 + 28906632-28907333
Length = 233
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 538 RFGPVQTPARPKHGTREDPPLGRPL 464
R G VQ R +HG R PPL P+
Sbjct: 175 RAGKVQVGPRRRHGCRRPPPLPLPV 199
>12_02_0325 + 17553387-17553514,17553847-17554003
Length = 94
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 492 GKTHHLVAPFKIGDILRQIARFHQR 418
GK HH+ A ++ L QIA+F +R
Sbjct: 8 GKVHHMRAKHRMAQSLGQIAKFKRR 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,208,207
Number of Sequences: 37544
Number of extensions: 309985
Number of successful extensions: 834
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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