Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2042
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   2.9  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   3.8  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   5.0  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = -2

Query: 457 W*HFAPNCSISPAHSKPKMKGVFGEESMAP*RTIKSWKFRPQAFTRIRTSPS 302
           W + APN     A  KPK + +    S  P   +    F P+    I + PS
Sbjct: 189 WEYRAPNAPCFTAPVKPKARNLLSSVSTTPSPEV----FSPKKMENIESPPS 236


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 349 WKFRPQAFTRIRTSPSPTVGSGFLSILTVLRPPKPVSTTAR 227
           + F+P A     T  + T  S  LS +T   P  PV TTAR
Sbjct: 798 YTFKPFASRLRATESTATESSSTLSTVTTTLP--PVVTTAR 836


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
 Frame = +2

Query: 368 GRHRLFTEDSFHLGLRMRW*NRAIWRKMSPILKGAT-------------KWWVFPSTVLG 508
           G  RL  +  F LG R     R  WR ++P+L                 + +V+P+   G
Sbjct: 516 GVDRLCKDTEFMLGHRPNLYWRLCWRWITPLLMFVILIYNLVTLEPLMYRQYVYPTVAYG 575

Query: 509 PSWCLY 526
             WC++
Sbjct: 576 IGWCIF 581


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,439
Number of Sequences: 2352
Number of extensions: 10843
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)