Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2041
         (554 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496232-1|AAS77218.1|  211|Homo sapiens truncated alpha-1,4-gal...    31   2.7  
BC000128-1|AAH00128.1|  327|Homo sapiens immediate early respons...    29   8.3  
AJ251089-1|CAB91983.1|  327|Homo sapiens hypothetical protein pr...    29   8.3  
AF178984-1|AAF44348.1|  327|Homo sapiens hypothetical protein SB...    29   8.3  

>AY496232-1|AAS77218.1|  211|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 211

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -2

Query: 445 TCSTCWGVWV*GWRRGTRPSPLG 377
           TC TCW  W  G   GT P P G
Sbjct: 144 TCWTCWNSWTCGSCSGTHPWPTG 166


>BC000128-1|AAH00128.1|  327|Homo sapiens immediate early response 5
           protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = -2

Query: 244 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 74
           +G  P + R  R+PC C    EDP  +P    R    CA R   D P      C  ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221


>AJ251089-1|CAB91983.1|  327|Homo sapiens hypothetical protein
           protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = -2

Query: 244 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 74
           +G  P + R  R+PC C    EDP  +P    R    CA R   D P      C  ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221


>AF178984-1|AAF44348.1|  327|Homo sapiens hypothetical protein
           SBBI48 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = -2

Query: 244 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 74
           +G  P + R  R+PC C    EDP  +P    R    CA R   D P      C  ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,002,459
Number of Sequences: 237096
Number of extensions: 1980415
Number of successful extensions: 4418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4417
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)