Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2041
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113593-1|AAM29598.1|  154|Drosophila melanogaster RH42520p pro...    30   2.4  
AY071343-1|AAL48965.1|  154|Drosophila melanogaster RE37932p pro...    30   2.4  
AE014297-976|AAN13434.1|  154|Drosophila melanogaster CG9399-PB,...    30   2.4  
AE014297-975|AAF54407.1|  154|Drosophila melanogaster CG9399-PA,...    30   2.4  
L11451-1|AAA28918.1|  786|Drosophila melanogaster serine protein...    29   3.2  
AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p pro...    29   3.2  
AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA...    29   3.2  
AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA...    29   4.2  

>AY113593-1|AAM29598.1|  154|Drosophila melanogaster RH42520p
           protein.
          Length = 154

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 407 PTSNPHAPTGATSSLVNMVLGGKKTTCPTK*SELWSHP 520
           P++ P A  G  S L N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>AY071343-1|AAL48965.1|  154|Drosophila melanogaster RE37932p
           protein.
          Length = 154

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 407 PTSNPHAPTGATSSLVNMVLGGKKTTCPTK*SELWSHP 520
           P++ P A  G  S L N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>AE014297-976|AAN13434.1|  154|Drosophila melanogaster CG9399-PB,
           isoform B protein.
          Length = 154

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 407 PTSNPHAPTGATSSLVNMVLGGKKTTCPTK*SELWSHP 520
           P++ P A  G  S L N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>AE014297-975|AAF54407.1|  154|Drosophila melanogaster CG9399-PA,
           isoform A protein.
          Length = 154

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 407 PTSNPHAPTGATSSLVNMVLGGKKTTCPTK*SELWSHP 520
           P++ P A  G  S L N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>L11451-1|AAA28918.1|  786|Drosophila melanogaster serine proteinase
           protein.
          Length = 786

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +2

Query: 287 P*S*SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSLVNMVL 466
           P S +ST ++ +          RT +P  TT+R  T T+ PT     PT ATSS      
Sbjct: 402 PSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTT 459

Query: 467 GGKKTT 484
             K  T
Sbjct: 460 SSKTPT 465


>AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p
           protein.
          Length = 683

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +2

Query: 287 P*S*SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSLVNMVL 466
           P S +ST ++ +          RT +P  TT+R  T T+ PT     PT ATSS      
Sbjct: 299 PSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTT 356

Query: 467 GGKKTT 484
             K  T
Sbjct: 357 SSKTPT 362


>AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA
           protein.
          Length = 787

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +2

Query: 287 P*S*SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSLVNMVL 466
           P S +ST ++ +          RT +P  TT+R  T T+ PT     PT ATSS      
Sbjct: 403 PSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTT 460

Query: 467 GGKKTT 484
             K  T
Sbjct: 461 SSKTPT 466


>AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA
           protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +2

Query: 374 TTKR*WTCTSSPTSNPHAPTGATSSLVNMVLGGKKTTCPTK*SELWSHPTWA*TTNT 544
           TTK   T T++PTS    PT  T++      G   TT PT  +   + PT    T T
Sbjct: 228 TTKTTTTPTTTPTS---TPTTTTTTTTTQTTGTSTTTTPTTTTPTTTTPTITTPTTT 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,831,430
Number of Sequences: 53049
Number of extensions: 615469
Number of successful extensions: 1648
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)