Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2041
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 2.2
U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical ... 29 2.2
Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical pr... 29 3.0
EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha 1,2-fuc... 29 3.0
AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 29 3.0
Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 27 6.9
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 27 6.9
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL117207-6|CAB60396.2| 372|Caenorhabditis elegans Hypothetical ... 27 6.9
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.1
AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical... 27 9.1
>U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical
protein K04E7.1 protein.
Length = 178
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 543 VFVVHAHVGWLHNSDYFVGHVVFFPPKTMLTKELVAPVGACG 418
V+V ++ WLH S G+V FP T L LV CG
Sbjct: 52 VYVTNSICSWLHISFVVKGYVTSFPLNTWLVVSLVV-TAVCG 92
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 507 NSDYFVGHVVF-FPPKTMLTKELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 331
NS YFVGH F F ++ +++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 330 TQKLFAAPVD 301
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 507 NSDYFVGHVVF-FPPKTMLTKELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 331
NS YFVGH F F ++ +++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 330 TQKLFAAPVD 301
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 507 NSDYFVGHVVF-FPPKTMLTKELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 331
NS YFVGH F F ++ +++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 330 TQKLFAAPVD 301
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical
protein C50E3.3 protein.
Length = 128
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -2
Query: 454 NQGTCSTCWGVWV*GWRRGTRPSPLGRLQWGSCPQQNGSKFHAKTLCRSS 305
N + S WGVW GTR + G + C G KF+ KTL S
Sbjct: 16 NNVSKSEQWGVWF----DGTRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61
>AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical
protein Y113G7B.7 protein.
Length = 314
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 460 GLRWEEDYVPHEVIRIVEPSYVGMNN 537
GL +D + EV+R+ +PSY+G +N
Sbjct: 263 GLILADDEIEPEVVRLFDPSYIGNDN 288
>Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical
protein F08A8.5b protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 465 KTMLTKELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 319
KT+ P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 81 KTLQLMLFAFPSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 129
>Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical
protein F08A8.5a protein.
Length = 383
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 465 KTMLTKELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 319
KT+ P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 62 KTLQLMLFAFPSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha
1,2-fucosyltransferase protein.
Length = 383
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 465 KTMLTKELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 319
KT+ P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 62 KTLQLMLFAFPSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical
protein F56D6.15 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 380 KR*WTCTSSPTSNPHA--PTGATSSLVNMVLGGKKT 481
K + C+ PT P A PT T++ VN LGG++T
Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148
>Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical
protein T07C12.14 protein.
Length = 215
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 145 KHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVK 279
+HL + E E K+ D+L ++AE ++ + F+E R K
Sbjct: 35 EHLTQEEYERKKTDILRRAVLAESQYIALRTQLRDNKFREAREYK 79
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 190 EDPIASPLVHVRLGASCAWRF**DSPSFCN 101
E PI S V R G SC + SP FCN
Sbjct: 647 ECPIGSVEVDPRFGTSCRYSLQCPSPYFCN 676
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 397 YLVANLKPTRPNRCYKFLG*HGLRWEEDYVPHEVIRIV 510
+L+ L+ R + C K L GLRWE+ + P +I+ V
Sbjct: 392 HLINELEFAR-DECIKELKLTGLRWEQAFTPEALIQCV 428
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 397 YLVANLKPTRPNRCYKFLG*HGLRWEEDYVPHEVIRIV 510
+L+ L+ R + C K L GLRWE+ + P +I+ V
Sbjct: 407 HLINELEFAR-DECIKELKLTGLRWEQAFTPEALIQCV 443
>AL117207-6|CAB60396.2| 372|Caenorhabditis elegans Hypothetical
protein Y60A3A.8 protein.
Length = 372
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 34 PINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVE 159
PI+ P ++ P + ++ V + YKN CL K +K + LV+
Sbjct: 2 PISEPTWAELPFLFKSAVVELLPYKNRCCLRKCSKSDQFLVD 43
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 463 DHVNQGTCSTCWGVWV*GWRRGTRPSPLGRL 371
D NQG C +CW G G LG+L
Sbjct: 134 DVKNQGMCGSCWAFSATGALEGQHARKLGQL 164
>AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical
protein Y39G10AR.5 protein.
Length = 917
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 91 DNKYYKNLGCLIKNAKRKKHLVEHEQEEKQWDLLDNYMVAEDPFL 225
DN Y L CLI+ ++ K H+ H + K +LD ++A + L
Sbjct: 568 DNTYITGLNCLIEISRNKSHIF-HPLDAKL--VLDILLIASERIL 609
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,074,369
Number of Sequences: 27780
Number of extensions: 314735
Number of successful extensions: 894
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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