Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2040
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1047 - 23927822-23928112,23928736-23928981,23929119-239293... 29 1.8
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 29 1.8
02_03_0161 + 15828887-15828985,15829066-15829686,15829759-158299... 29 1.8
02_05_1308 + 35601314-35601390,35602486-35602566,35603513-356040... 28 2.4
07_03_1695 - 28775525-28776098,28776586-28776693,28777129-28777448 28 3.1
06_03_0854 + 25400855-25403741,25406174-25407708 28 3.1
12_02_1077 - 25871439-25871453,25872805-25872867,25872976-25873977 27 4.1
03_06_0297 - 32924162-32924605 27 4.1
01_05_0033 + 17390571-17390894,17394152-17394199,17394479-173945... 27 4.1
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 27 5.5
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 27 5.5
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 27 5.5
12_02_1178 + 26718283-26719368 27 7.2
04_03_0202 + 12637271-12637499,12638217-12638821 27 7.2
02_01_0302 - 2021221-2023305 27 7.2
11_01_0483 - 3718104-3718802,3718817-3719308 26 9.6
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 26 9.6
06_03_1445 - 30209354-30209396,30209798-30209875,30210220-302102... 26 9.6
06_03_1433 - 30129184-30129226,30129628-30129705,30130050-301301... 26 9.6
06_03_1416 + 30027066-30027663,30027739-30027848,30027927-300280... 26 9.6
05_03_0620 - 16286207-16286342,16286861-16286955,16287051-162871... 26 9.6
04_01_0034 - 401208-402923 26 9.6
03_01_0018 - 157657-158487 26 9.6
>08_02_1047 -
23927822-23928112,23928736-23928981,23929119-23929395,
23929522-23929799,23931147-23931572
Length = 505
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 238 PPPRYPASSWRCTAPPGCSL*AQSSMDSLKHSPSKWGTGRKKAI 369
P P P+S W AP L ++ + PSKW G +++
Sbjct: 7 PSPPLPSSPWPARAPRRGGLLRARAVRAAPRPPSKWSLGSWRSL 50
>05_01_0397 -
3129679-3130144,3130655-3131104,3132215-3132273,
3133136-3133305,3134655-3134771,3134980-3135166
Length = 482
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 208 APRYGSSRLVPPPRYPASSWRCTAPPGCS 294
A R G R PPP P + C PPG S
Sbjct: 368 AHRSGGMRTAPPPPLPENPAFCLFPPGSS 396
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 145 PVYRRLFT*WRGPGDSRSGRKAPRYGSSRLVPPPR 249
P RRLF W G G S ++P S R + PR
Sbjct: 447 PAPRRLFGQWIGVGRSSPENRSPEGSSYRQMHTPR 481
>02_03_0161 +
15828887-15828985,15829066-15829686,15829759-15829908,
15829994-15830389,15830455-15830487,15830553-15830693,
15830793-15830924,15830999-15831082,15831159-15831461,
15831543-15831734,15831805-15831942,15832019-15832143,
15832223-15832319
Length = 836
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 353 PVPHLEGECLRLSIDDCAYKEHPGGAVHLHELA 255
P PH+ GE + YK+H G + LHELA
Sbjct: 128 PKPHMNGEDYKYY---SMYKQHKGKNISLHELA 157
>02_05_1308 +
35601314-35601390,35602486-35602566,35603513-35604064,
35604998-35605408,35606830-35607544
Length = 611
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 284 GGAVHLHELAG*RGGGTSRLEPYRGAFRPLRESPGP 177
GGA + H G G R P++GA E+P P
Sbjct: 254 GGATYAHRQGGGGSSGQGRRRPWQGARGRRGEAPAP 289
>07_03_1695 - 28775525-28776098,28776586-28776693,28777129-28777448
Length = 333
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 199 GRKAPRYGSSRLVPPPRYPASSWRCTAPP--GC 291
GR+ +YG + P P S +RCT P GC
Sbjct: 124 GRQWRKYGQKHIQDSPNNPRSYYRCTHRPDQGC 156
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 178 GPGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAP 282
G G R G++AP + + PPP P + AP
Sbjct: 356 GGGRGRGGKRAPTTAVTVVAPPPPVPTPAAGAAAP 390
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 208 APRYGSSRLVPPPRYPASSWRCTAPPGCSL*AQSSMDSLKHSPSKWGTGRKK 363
AP ++ ++PPP PA++ AP + SL S + G GR +
Sbjct: 531 APAPAAAEVIPPPPLPAAASTAAAPAAERKRKLLTASSLSSSGGERGRGRAR 582
>12_02_1077 - 25871439-25871453,25872805-25872867,25872976-25873977
Length = 359
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 126 RRFSRNSGVSSLIYLMAGSGGL-AEWSEGAAVWFQPAGASAPLPGELV 266
+ F +GV L+ + GSG A AA W P + +P P E+V
Sbjct: 277 QEFPLAAGVDDLLVVSIGSGSSSAATPSTAAGWRTPLPSRSPSPAEMV 324
>03_06_0297 - 32924162-32924605
Length = 147
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = -1
Query: 353 PVPHLEGECLRLSIDDCAYKEHPGGAVHLHELAG*RGGGTSRLEPYRGAFRPLRESP 183
P+P L G + C ++ G A G R GGT E G R L E P
Sbjct: 7 PLPLLRGAAAAAAARSCLHRPQVGAAAARRAAVGVRCGGTPPAE-VPGTDRSLEELP 62
>01_05_0033 +
17390571-17390894,17394152-17394199,17394479-17394526,
17395224-17395400,17395492-17395642,17395742-17395828,
17397236-17397360,17397608-17397726,17399983-17400082,
17400188-17400223
Length = 404
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 178 GPGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPPGCSL*AQSSMDSLKHSPSKWGTGR 357
GP + R +A + + PPP PA R + P C+ +++H P + R
Sbjct: 5 GPAERRDEAQAAMGNGNGVAPPPLRPAG--RPSGAPACADRRLRLNPNMEHKPQDYSDVR 62
Query: 358 KKAIPS 375
+ P+
Sbjct: 63 GEYAPA 68
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 174 AGSGGLAEWSEGAAVWFQPAGASAPLPGE-LVEXXXXXXXXXXXXXXNGQPQTFALQM 344
+G GG+AE+ W G S PGE NG P ++AL +
Sbjct: 26 SGGGGVAEYEAQFEAWCAEHGRSYATPGERAARLAAFADNAAFVAAHNGAPASYALAL 83
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 178 GPGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPPGCSL*AQS 309
GP D G PR S P PA++ +PP C+ A+S
Sbjct: 73 GPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSPSPPACASAAES 116
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 178 GPGDSRSGRKAPRYGSSRLVPPPRYPASS 264
GP G P Y + RL+PPP A+S
Sbjct: 490 GPQGLTKGGAKPPYSALRLLPPPSIAAAS 518
>12_02_1178 + 26718283-26719368
Length = 361
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 302 AYKEHPGGAVHLHELAG*RGGGTSRLEPYRGAFR 201
AY HP G +G GGGT ++ RG +R
Sbjct: 179 AYAVHPDGHTVFVSTSGDGGGGTYTVDTKRGEWR 212
>04_03_0202 + 12637271-12637499,12638217-12638821
Length = 277
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +1
Query: 184 GDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPPGCSL*AQSSMDSL----KHSPSKWGT 351
G + A S P RY WR T GC S DSL P +GT
Sbjct: 214 GSNTCAGAAAAASSGSSSPCTRYTQVVWRNTTQVGCGRIVCDSGDSLLVCDYFPPGNYGT 273
Query: 352 GR 357
GR
Sbjct: 274 GR 275
>02_01_0302 - 2021221-2023305
Length = 694
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 181 PGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPPGCSL*AQSSMDSLKHSPS 339
P S R+ P P P YP+ S APPG + + S S +PS
Sbjct: 403 PVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPGSNTPSYPSPPSSATTPS 455
>11_01_0483 - 3718104-3718802,3718817-3719308
Length = 396
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 178 GPGDSRSGRKAPRYGSSRLVPPPRYPASS 264
G GD R+ P SRL+ PPR S
Sbjct: 144 GDGDEDPPRRPPSLSLSRLIRPPRLRGGS 172
>09_02_0322 -
7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 178 GPGDSR-SGRKAPRYGSSRLVPPPRYPASSWRCTAPP 285
G G R G R+ ++R PPPR +S W APP
Sbjct: 19 GGGRGRFGGGGGSRFSAARDDPPPRRSSSGWG-VAPP 54
>06_03_1445 -
30209354-30209396,30209798-30209875,30210220-30210285,
30212275-30212322,30212408-30212571,30212726-30213581,
30213673-30213786,30213853-30213996,30214075-30214304,
30214584-30214724,30214810-30214887,30214972-30215053,
30215130-30215184,30215284-30215407,30215548-30215641,
30215718-30215794,30215873-30215982,30216058-30216655
Length = 1033
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 175 RGPGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPP 285
+GP R R A +GSS V P P ++ T PP
Sbjct: 463 QGPPPVRHSRMAGEHGSSSSVKPRPSPTNAQLETRPP 499
>06_03_1433 -
30129184-30129226,30129628-30129705,30130050-30130115,
30132105-30132152,30132238-30132401,30132556-30133411,
30133503-30133616,30133683-30133826,30133905-30134134,
30134414-30134554,30134640-30134717,30134802-30134883,
30134958-30135012,30135112-30135235,30135376-30135469,
30135546-30135622,30135701-30135810,30135886-30136483
Length = 1033
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 175 RGPGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPP 285
+GP R R A +GSS V P P ++ T PP
Sbjct: 463 QGPPPVRHSRMAGEHGSSSSVKPRPSPTNAQLETRPP 499
>06_03_1416 +
30027066-30027663,30027739-30027848,30027927-30028003,
30028080-30028173,30028314-30028437,30028537-30028591,
30028666-30028747,30028832-30028909,30028995-30029135,
30029416-30029645,30029724-30029867,30029934-30030047,
30030139-30030994,30031149-30031312,30031398-30031445,
30033435-30033500,30033845-30033922,30034324-30034366
Length = 1033
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 175 RGPGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPP 285
+GP R R A +GSS V P P ++ T PP
Sbjct: 463 QGPPPVRHSRMAGEHGSSSSVKPRPSPTNAQLETRPP 499
>05_03_0620 -
16286207-16286342,16286861-16286955,16287051-16287158,
16287262-16287357,16287446-16287604
Length = 197
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 33 SIKSVYLFIDK*IILRQLCFMWFVMKFCES*RRF 134
+I VYLF+ II+ + WF KF E+ +F
Sbjct: 111 AIAFVYLFVFPPIIMNWMRLRWFKRKFVETYLQF 144
>04_01_0034 - 401208-402923
Length = 571
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 181 PGDSRSGRKAPRYGSSRLVPPPRYPASSWRCTAPPGC 291
P R+ P L PPPR A +C P GC
Sbjct: 312 PQQQRAKPSRPPPPPPPLDPPPRAAAPPAKCKRPDGC 348
>03_01_0018 - 157657-158487
Length = 276
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 183 GGLAEWSEGAAVWF-QPAGASA 245
GG A W A W+ QP GA A
Sbjct: 43 GGAAAWGNAKATWYGQPNGAGA 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,244,370
Number of Sequences: 37544
Number of extensions: 259706
Number of successful extensions: 842
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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