Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2040
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr...    30   0.69 
AC024211-8|AAF36062.1|  832|Caenorhabditis elegans Hypothetical ...    28   2.1  
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    27   4.9  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    27   4.9  
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ...    27   4.9  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    27   6.4  
AL117204-14|CAB55155.1|  264|Caenorhabditis elegans Hypothetical...    27   6.4  

>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
           protein C38D4.3 protein.
          Length = 1784

 Score = 29.9 bits (64), Expect = 0.69
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -1

Query: 344 HLEGECLRLSIDDCAYKEHPGGAVHLHELA 255
           ++ G  L+ ++DD AY+E+P  AV++  L+
Sbjct: 198 YVSGSVLQYTLDDGAYREYPTAAVYISALS 227


>AC024211-8|AAF36062.1|  832|Caenorhabditis elegans Hypothetical
           protein Y76B12C.1 protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 304 QSSMDSLKHSPSKWGTGRKKA 366
           Q S  S+ H PSKW T R+K+
Sbjct: 77  QPSTSSIPHRPSKWATVREKS 97


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 6/29 (20%), Positives = 21/29 (72%)
 Frame = -2

Query: 142 FLENLRQLSQNFITNHIKHNCRNIIHLSI 56
           +++ + +   +F++N ++HN ++ IH+++
Sbjct: 122 YMKKMNESDMHFVSNMVEHNSKSGIHITV 150


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 6/29 (20%), Positives = 21/29 (72%)
 Frame = -2

Query: 142 FLENLRQLSQNFITNHIKHNCRNIIHLSI 56
           +++ + +   +F++N ++HN ++ IH+++
Sbjct: 122 YMKKMNESDMHFVSNMVEHNSKSGIHITV 150


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 6/29 (20%), Positives = 21/29 (72%)
 Frame = -2

Query: 142 FLENLRQLSQNFITNHIKHNCRNIIHLSI 56
           +++ + +   +F++N ++HN ++ IH+++
Sbjct: 122 YMKKMNESDMHFVSNMVEHNSKSGIHITV 150


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 6/29 (20%), Positives = 21/29 (72%)
 Frame = -2

Query: 142 FLENLRQLSQNFITNHIKHNCRNIIHLSI 56
           +++ + +   +F++N ++HN ++ IH+++
Sbjct: 122 YMKKMNESDMHFVSNMVEHNSKSGIHITV 150


>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
           protein Y20F4.4 protein.
          Length = 1319

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 139 LENLRQLSQNFITNHIKHNCRNIIHLSINR 50
           +EN+RQL Q+ +     H CRNI  +   R
Sbjct: 86  VENMRQLRQDRMKTIEAHRCRNIFIVGATR 115


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
 Frame = +1

Query: 172 WRGPGDSRSGRKAPRY---GSSR-LVPPPRYPASSWRCTAPP 285
           WRGP         P Y   G  R   PPP   A +WR   PP
Sbjct: 75  WRGPPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPPP 116


>AL117204-14|CAB55155.1|  264|Caenorhabditis elegans Hypothetical
           protein Y116A8C.23 protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 211 PRYGSSRLVPPPRYPASSWRCTAPPGCSL*AQSSMDSLKHSPSK 342
           P+ GSS +  PPRY  S W  T     S  +Q S  S+K + +K
Sbjct: 221 PKPGSSTVTSPPRY--SYWERTFGRARSAASQCSEVSVKSTTAK 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,034,313
Number of Sequences: 27780
Number of extensions: 196721
Number of successful extensions: 500
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)