Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2038
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     89   7e-20
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    88   2e-19
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    26   0.69 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   2.8  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   2.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   2.8  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.7  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   4.9  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   4.9  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   6.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   8.5  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 89.4 bits (212), Expect = 7e-20
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
 Frame = +3

Query: 21  CIPCIESKQSRLPFPKKSHTRAKEKLGLVHSE*PL*SPSGPFIQWC*VFSKFH**LLQE- 197
           C  CIE K +R PFP  +   + E L ++HS+       GP  +      +++  L+ + 
Sbjct: 314 CECCIECKMARSPFPPVAGKTSTEVLDIIHSD-----VCGPMEETTLGGCRYYMTLIDDH 368

Query: 198 ---AICLFFEYKNETFRYFQQFKALVEKETGKELKILRTARGGEYMGE-FQEFLKKNGIQ 365
                  F + K+E      ++  LV+ + G++ +I+R+ +GGEY  +  ++F    GI+
Sbjct: 369 SRYTFVYFLKKKSEAEDKIHEYVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADEGIK 428

Query: 366 HQKTIADSPQQNGVAERANRSVIEKAWSMLRDPRLGMKFWAE 491
            + T A SPQQNGVAER NRS+ E    MLRD  +  +FWAE
Sbjct: 429 MEFTAAYSPQQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAE 470


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
 Frame = +3

Query: 12  FKQCIPCIESKQSRLPFPKKSHTRAKEKLGLVHSE*--PL*S-PSGPFIQWC*VFSKFH* 182
           F+ C  C+E K +R PFP  +  +    L LVH++   P+ +  SG    +  +   F  
Sbjct: 46  FQTCECCVEGKIARKPFPPITERQTTRVLDLVHTDICGPMNTVTSGGSRYFLTMIDDFS- 104

Query: 183 *LLQEAICLFFEYKNETFRYFQQFKALVEKETGKELKILRTARGGEYMGE-FQEFLKKNG 359
              +     F + K+E     +++  +V    G+   ++R+ +GGEY  +   +F +  G
Sbjct: 105 ---RYTTVYFLKRKSEAAEVIEEYVTMVHNRFGRNPIVIRSDQGGEYKSKRLGQFYRAKG 161

Query: 360 IQHQKTIADSPQQNGVAERANRSVIEKAWSMLRDPRLGMKFWAE 491
           I  Q T   SPQQNGVAER NR+++E A  ML D +LG +FWAE
Sbjct: 162 IVPQFTAGYSPQQNGVAERKNRTLVEMARCMLIDAKLGYRFWAE 205



 Score = 46.0 bits (104), Expect = 8e-07
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +1

Query: 115 SDLCDPLQVPSFSGARYFLSFIDDFSRKQYVYFLNTK 225
           +D+C P+   +  G+RYFL+ IDDFSR   VYFL  K
Sbjct: 79  TDICGPMNTVTSGGSRYFLTMIDDFSRYTTVYFLKRK 115


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 26.2 bits (55), Expect = 0.69
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 22  VFLV*KVNKVDSLFPKSHTLELRKN*VLYIVS 117
           ++LV K  K DSL+PK    + R N  L+  S
Sbjct: 73  IYLVTKYGKDDSLYPKDPVKQARVNSALHFES 104


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 291  KILRTARGGEYMGEFQEFLKK-NGIQHQKTI 380
            ++L    GG+ +GE QEF +K   I+ Q+ I
Sbjct: 935  QVLTRIGGGQLIGEMQEFAQKVQRIEKQQKI 965


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = +1

Query: 40   VNKVDSLFPKSHTLELRKN*VLYIVSDLCDPLQVPSFSGARYFLSFIDDFSRKQYVYFLN 219
            +NK      K     L  N +  ++ +L + L VP+  G +  + F+ +     Y+Y   
Sbjct: 822  INKKADNGSKKIEFRLNPNLLTMVIKNLDNLLAVPTGCGEQNMVKFVPNILVLDYLYATG 881

Query: 220  TK 225
            +K
Sbjct: 882  SK 883


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 345 LKKNGIQHQKTIADSPQQNGVAERANRSVIEKAW 446
           +K++   HQ+ +AD      V  R  R+V  + W
Sbjct: 847 IKEDARCHQRYLADPEASRAVIRREERAVTLEVW 880


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 247 WKYRKVSFLYSKNKHIASWRSHQ*NLE 167
           WKYR +S L++   H  + R+ +  L+
Sbjct: 215 WKYRSISSLHAPPSHPGAHRAAEPRLD 241


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 379 IVFWCWMPFFLRNS*NSPIYSPP 311
           +VF  W+PF LR S     Y  P
Sbjct: 317 VVFLIWLPFILRMSRPGEPYPHP 339


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 373 KLLRIVRNRMVLLNGPIGPS 432
           +LL + RNR+  L+GP+  S
Sbjct: 758 RLLDLSRNRLTTLDGPLAES 777


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 284 LSRFFLNKSFELLEIPKS 231
           LS F+L+  +++LE+P S
Sbjct: 202 LSEFYLSVEWDILEVPAS 219


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 332 VSGISQEEWHPTP 370
           +S I QE WHP+P
Sbjct: 528 LSKIMQECWHPSP 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,420
Number of Sequences: 2352
Number of extensions: 11309
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)