Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2038
         (534 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   3.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   7.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.9  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 415 RSATPFCCGLSAIVFWCWMPFFLRN 341
           R AT     +  +   CW+PFF  N
Sbjct: 615 RKATKTLAIVLGVFLICWLPFFTCN 639


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 367 CWMPFFL 347
           CW+PFFL
Sbjct: 339 CWLPFFL 345


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 367 CWMPFFL 347
           CW+PFFL
Sbjct: 339 CWLPFFL 345


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 367 CWMPFFL 347
           CW+PFFL
Sbjct: 339 CWLPFFL 345


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 284 LSRFFLNKSFELLEIPKS 231
           LS F+L+  +++LE+P S
Sbjct: 206 LSDFYLSVEWDILEVPAS 223


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 367 CWMPFFLRN 341
           CW+PFF+ N
Sbjct: 347 CWLPFFVVN 355


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 367 CWMPFFL 347
           CW+PFF+
Sbjct: 318 CWLPFFI 324


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 388 LSAIVFWCWMPFFL 347
           +SA +  CW+PFF+
Sbjct: 378 MSAFIV-CWLPFFV 390


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 367 CWMPFFLRN 341
           CW+PFF  N
Sbjct: 284 CWVPFFCVN 292


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 382 AIVFWCWMPFFL 347
           A+ F CW P+++
Sbjct: 267 AVFFICWTPYYV 278


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 277 VSFSTRALNCW 245
           +S S  ALNCW
Sbjct: 232 ISISGTALNCW 242


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 277 VSFSTRALNCW 245
           +S S  ALNCW
Sbjct: 103 ISISGTALNCW 113


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 277 VSFSTRALNCW 245
           +S S  ALNCW
Sbjct: 232 ISISGTALNCW 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,121
Number of Sequences: 438
Number of extensions: 3836
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)