Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2037
         (487 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    46   9e-05
AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens ...    41   0.003
AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens ...    41   0.003
AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens ...    36   0.10 
AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens ...    33   0.40 
AF189251-1|AAF28308.1|  345|Homo sapiens cytomegalovirus partial...    31   1.6  

>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 45.6 bits (103), Expect = 9e-05
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = +2

Query: 23  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 202
           I  D  KAF+ ++H  +++ L+  GI    L++I +    R   + + G +     LK G
Sbjct: 28  ISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTANIILNGQQLEAFPLKTG 87

Query: 203 VPQGSILGPFLFLIYIKRFALA 268
             QG  L P LF I ++  A A
Sbjct: 88  TRQGCPLSPLLFNIVLEVLARA 109


>AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45950 fis, clone PLACE7008136. ).
          Length = 129

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 23/82 (28%), Positives = 37/82 (45%)
 Frame = +2

Query: 23  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 202
           I  D  K FD ++H  +++ L   GI    L++I +        + + G       L+ G
Sbjct: 37  ISIDARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKAIYHKSTANIILNGEMLKAFPLRTG 96

Query: 203 VPQGSILGPFLFLIYIKRFALA 268
             QG +L P LF I ++  A A
Sbjct: 97  TRQGCLLSPLLFSIVLEVLARA 118


>AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37568 fis, clone BRCOC2002323. ).
          Length = 272

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 22/77 (28%), Positives = 38/77 (49%)
 Frame = +2

Query: 23  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 202
           I  D  KAF+ ++H  +++ L+  GI    +++I +     I  + + G +  G  L  G
Sbjct: 3   ISIDAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTG 62

Query: 203 VPQGSILGPFLFLIYIK 253
             QG  L P LF I ++
Sbjct: 63  TRQGCPLSPLLFNIVLE 79


>AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45866 fis, clone OCBBF3001616. ).
          Length = 184

 Score = 35.5 bits (78), Expect = 0.10
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +2

Query: 23  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 202
           I  D  KAF+ ++H  +++ +    I+   L +I +        + + G +     L++G
Sbjct: 43  ISIDAEKAFEEIQHRFMIKTVSKISIQGTYLNVIKAIYDKPTANMILNGEKLKAFPLRIG 102

Query: 203 VPQGSILGPFLFLIYIK 253
             QG  L P LF I ++
Sbjct: 103 TRQGCPLSPLLFNIALE 119


>AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44843 fis, clone BRACE3050270. ).
          Length = 188

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 22/82 (26%), Positives = 37/82 (45%)
 Frame = +2

Query: 23  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 202
           I  D  KAFD ++H  +++ L   GI    L+++ +        + + G++     LK G
Sbjct: 8   ISIDAEKAFDEIQHHFMLKILDKLGIDGTYLKIVRAIYDKPTANIILNGHKLEVFPLKTG 67

Query: 203 VPQGSILGPFLFLIYIKRFALA 268
             Q   L P LF   ++  A A
Sbjct: 68  TRQECPLLPLLFNTVLEVLARA 89


>AF189251-1|AAF28308.1|  345|Homo sapiens cytomegalovirus partial
           fusion receptor protein.
          Length = 345

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 26/83 (31%), Positives = 45/83 (54%)
 Frame = +1

Query: 127 FLFIRKDTNSRCERK*IFRHHVENGCTSRFHFGSFFISNIYQTICPSFLLSPDTRSYYSQ 306
           ++F  ++T+ +C  K    H V     +++ F   F+SN++ TIC    L+    +Y  +
Sbjct: 262 YMFAVRNTHFKCTFKFRSLHRV-----NKYKF-PIFVSNVFSTIC----LTSKHSAY--E 309

Query: 307 MIHLYYLKLNDNYKSMTK*MMRF 375
            +HLY  KL D + S+ K M+RF
Sbjct: 310 NLHLYKNKLADIH-SLYKKMLRF 331


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,812,404
Number of Sequences: 237096
Number of extensions: 1395513
Number of successful extensions: 2637
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)