Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2037
(487 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 58 5e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 58 5e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 58 5e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 58 5e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 56 3e-08
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 56 3e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 56 3e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 55 6e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 53 2e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 52 3e-07
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 52 3e-07
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 52 3e-07
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 52 3e-07
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 52 3e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 52 6e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 52 6e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 52 6e-07
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 50 1e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 48 5e-06
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 48 5e-06
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 48 5e-06
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 44 8e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 42 3e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 3e-04
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 40 0.001
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.010
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P... 35 0.068
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 33 0.21
AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-P... 29 4.5
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSS 181
E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G +S
Sbjct: 175 EKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 233
Query: 182 GT-TLKMGVPQGSILGPFLFLIY 247
++ GVPQGSILGP L+ IY
Sbjct: 234 RIGNIRAGVPQGSILGPVLYSIY 256
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSS 181
E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G +S
Sbjct: 622 EKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Query: 182 GT-TLKMGVPQGSILGPFLFLIY 247
++ GVPQGSILGP L+ IY
Sbjct: 681 RIGNIRAGVPQGSILGPVLYSIY 703
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSS 181
E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G +S
Sbjct: 622 EKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Query: 182 GT-TLKMGVPQGSILGPFLFLIY 247
++ GVPQGSILGP L+ IY
Sbjct: 681 RIGNIRAGVPQGSILGPVLYSIY 703
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSS 181
E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G +S
Sbjct: 622 EKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Query: 182 GT-TLKMGVPQGSILGPFLFLIY 247
++ GVPQGSILGP L+ IY
Sbjct: 681 RIGNIRAGVPQGSILGPVLYSIY 703
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 32 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 211
D+ AFD V H+ L+ KL G ++++ ++L+ R +V++ ++S+ L GVPQ
Sbjct: 609 DIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQ 668
Query: 212 GSILGPFLFLIY 247
GS+LGP LF I+
Sbjct: 669 GSVLGPTLFNIF 680
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 193
C +F D+++AFD V + L+ K+ + +L+ SYL R+ V + SS T+
Sbjct: 115 CTALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTI 173
Query: 194 KMGVPQGSILGPFLFLIY 247
+ GVPQGS+LGP L+ +Y
Sbjct: 174 EAGVPQGSVLGPILYTLY 191
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 32 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 211
D+ AFD V H+ L+ KL G ++++ ++L+ R +V++ ++S+ L GVPQ
Sbjct: 557 DIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQ 616
Query: 212 GSILGPFLFLIY 247
GS+LGP LF I+
Sbjct: 617 GSVLGPTLFNIF 628
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 193
C +F D+S+AFD V + L+ K+ + + +L+ SYL R V S+ T+
Sbjct: 576 CTAVFLDVSQAFDKVWLDGLMFKIK-ISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTI 634
Query: 194 KMGVPQGSILGPFLFLIY 247
+ GVPQGS+LGP L+LIY
Sbjct: 635 EAGVPQGSVLGPTLYLIY 652
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 279 SRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCIKFTL 452
SR V FADDT++L + + +Q ++ + + W + +N +K K + FTL
Sbjct: 660 SRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFTL 717
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 193
C IF D+++AFD V + L+ K+ + +L+ SYL R+ + + S +
Sbjct: 574 CTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAI 632
Query: 194 KMGVPQGSILGPFLFLIYIKRFAL 265
+ GVPQGS+LGP L+ +Y F +
Sbjct: 633 EAGVPQGSVLGPILYTLYTADFPI 656
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 300 FADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCIKFTL 452
FADDT++L + K ++ ++ ++ V W +S+N +K K + FTL
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTL 715
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 507 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQ 565
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 566 IGAGVPQGSNLGPILYSIF 584
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 623 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQ 681
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 682 IGAGVPQGSNLGPILYSIF 700
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 623 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQ 681
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 682 IGAGVPQGSNLGPILYSIF 700
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 585 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQ 643
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 644 IGAGVPQGSNLGPILYSIF 662
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 623 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQ 681
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 682 IGAGVPQGSNLGPILYSIF 700
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 623 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQ 681
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 682 IGAGVPQGSNLGPLLYSIF 700
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGTT 190
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 635 CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQ 693
Query: 191 LKMGVPQGSILGPFLFLIY 247
+ GVPQGS LGP L+ I+
Sbjct: 694 IGAGVPQGSNLGPLLYSIF 712
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 193
C +F D+ +AFD V H+ L+ K+ ++ SYL R V V+ + S +
Sbjct: 579 CNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVM 637
Query: 194 KMGVPQGSILGPFLFLIY 247
+ GVPQGS+LGP L+ ++
Sbjct: 638 RAGVPQGSVLGPLLYSVF 655
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 193
C IF D+++AFD V + L+ K+ + +L+ SYL + + + S +
Sbjct: 574 CTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAI 632
Query: 194 KMGVPQGSILGPFLFLIYIKRFAL 265
+ GVPQGS+LGP L+ +Y F +
Sbjct: 633 EAGVPQGSVLGPILYTLYTADFPI 656
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 300 FADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCIKFTL 452
FADDT++L + K ++ ++ ++ V W +S+N +K K + FTL
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTL 715
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +2
Query: 17 LGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLK 196
+G F D+ +AFD V H L+ K L ++ S+L R V V G +SS +
Sbjct: 581 VGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYL-VVKSFLEERTFHVSVDGYKSSIKPIA 639
Query: 197 MGVPQGSILGPFLFLIY 247
GVPQGS+LGP L+ ++
Sbjct: 640 AGVPQGSVLGPTLYSVF 656
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 291 VVLFADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCIKF---TLKCI 461
+ +ADDT++L K K L + + + W N+ +N++K + F T C
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP 735
Query: 462 KSSLNG 479
SLNG
Sbjct: 736 GVSLNG 741
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +2
Query: 17 LGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLK 196
+G F D+ +AFD V H L+ K L ++ S+L R V V G +SS +
Sbjct: 383 VGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYL-VVKSFLEERTFHVSVDGYKSSIKPIA 441
Query: 197 MGVPQGSILGPFLFLIY 247
GVPQGS+LGP L+ ++
Sbjct: 442 AGVPQGSVLGPTLYSVF 458
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 291 VVLFADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCIKF---TLKCI 461
+ +ADDT++L K K L + + + W N+ +N++K + F T C
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP 537
Query: 462 KSSLNG 479
SLNG
Sbjct: 538 GVSLNG 543
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 193
C +F D+ +AFD V H L K+ + L+ SYL GR V S+ +
Sbjct: 578 CNSLFLDIREAFDRVWHIGLQLKIKQT-LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNV 636
Query: 194 KMGVPQGSILGPFLFLIY 247
GVPQGS+LGP L+ +Y
Sbjct: 637 AAGVPQGSVLGPLLYCLY 654
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 228 LFYF*YISNDLP*--LLIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRI 401
L Y Y S+D+P + + + + FADD + ++ + + D + D W R
Sbjct: 649 LLYCLY-SHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARR 707
Query: 402 NNLSLNSKKTKCIKFTLK 455
N+ +NS K+ + FTLK
Sbjct: 708 WNIGINSSKSNNVCFTLK 725
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +2
Query: 32 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 211
D S+AFD V +++++L + ++ I +++S R TV V + SS L G+PQ
Sbjct: 576 DFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQ 635
Query: 212 GSILGPFLFLIYIKRFA 262
GS + LFLI + +
Sbjct: 636 GSPISVILFLIAFNKLS 652
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 17 LGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTT-- 190
LG F D AFD VE + +L G R+ + L S+ SGR + SSGT
Sbjct: 573 LGTFVDFKGAFDNVEWSAALSRLADLGCRE--MGLWQSFFSGRRAVI----RSSSGTVEV 626
Query: 191 -LKMGVPQGSILGPFLF 238
+ G PQGSI GPF++
Sbjct: 627 PVTRGCPQGSISGPFIW 643
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 32 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 211
D +AFD V ++ +L +GI LI ++++ R V + S+ L G+PQ
Sbjct: 584 DFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQ 643
Query: 212 GSILGPFLFLIYIK 253
GS L LF+I I+
Sbjct: 644 GSPLSVVLFMIAIE 657
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 32 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 211
D+SKAFD + H ++ L YG G ++ + + G +++ G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 212 GSILGPFLFLIYIKR 256
G L P LF + + R
Sbjct: 542 GDPLSPILFNLVMDR 556
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 14 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQT-VDVKGNRSSGTT 190
C I D+ AF+ ++ + + G+ D +I +Y R+ V G RS
Sbjct: 551 CAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--Q 608
Query: 191 LKMGVPQGSILGPFLFLI 244
+ GVPQGS+LGP L+ I
Sbjct: 609 VSAGVPQGSVLGPILWNI 626
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 288 EVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCI----KFTLK 455
E+ FADD ++ K ++ D N AI+ + W L + + KT+ + + +++
Sbjct: 641 ELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLLSSRKSVE 700
Query: 456 CIKSSLNG 479
C++ + G
Sbjct: 701 CMRVEVKG 708
>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
protein.
Length = 1799
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 14 CLGIFCDLSKAFDC-VEHETLVRKL-HHYGIRDGALELITSYLSGRIQTVDVKGNRSSGT 187
C+ + L+K +H+ ++KL + Y IRDG + I S S ++ +++ N + +
Sbjct: 37 CVAVTVVLTKIVHVKTQHQQSLQKLSNQYVIRDGDTQYIKSRTSEKVSQLNLNKNNDTAS 96
Query: 188 TLKMGVP 208
LK+G P
Sbjct: 97 KLKIGAP 103
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 267 LLIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVYWFRINNLSLNSKKTKCI 440
L + R E+V FADD +LL K + + N I + +W L L +KTK +
Sbjct: 72 LPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAV 129
>AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-PA
protein.
Length = 1080
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 248 YILEIKKDPKWNLEVHPFSTWCLKIYFLSH 159
++ +I +D WNL + P S W LK+ +H
Sbjct: 569 FLDQILRDEHWNLALQPDSAWRLKVNKPTH 598
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,593,713
Number of Sequences: 53049
Number of extensions: 420066
Number of successful extensions: 902
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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