Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2036
(540 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 283 7e-77
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 283 7e-77
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 283 7e-77
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 281 3e-76
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 256 1e-68
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 256 1e-68
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 254 2e-68
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 254 2e-68
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 254 2e-68
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 253 5e-68
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 250 6e-67
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 250 6e-67
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 236 6e-63
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 234 3e-62
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 215 1e-56
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 190 4e-49
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 141 3e-34
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 140 4e-34
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 140 6e-34
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 138 2e-33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 138 2e-33
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 135 2e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 120 5e-28
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 120 5e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 76 1e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 76 1e-14
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.30
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.1
Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical p... 29 2.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 4.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 4.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 4.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 4.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 4.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 4.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 4.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 4.9
Z81136-6|CAB03461.3| 179|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 27 6.5
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 27 6.5
AL032644-8|CAA21672.3| 179|Caenorhabditis elegans Hypothetical ... 27 6.5
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 27 6.5
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 27 6.5
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 27 8.6
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 8.6
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 8.6
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 8.6
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 27 8.6
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 27 8.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 283 bits (693), Expect = 7e-77
Identities = 122/141 (86%), Positives = 135/141 (95%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD CTGLQGFL+FHSF
Sbjct: 121 RIRRLADNCTGLQGFLVFHSF 141
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 283 bits (693), Expect = 7e-77
Identities = 122/141 (86%), Positives = 135/141 (95%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD CTGLQGFL+FHSF
Sbjct: 121 RIRRLADNCTGLQGFLVFHSF 141
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 283 bits (693), Expect = 7e-77
Identities = 122/141 (86%), Positives = 135/141 (95%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD CTGLQGFL+FHSF
Sbjct: 121 RIRRLADNCTGLQGFLVFHSF 141
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 281 bits (688), Expect = 3e-76
Identities = 121/140 (86%), Positives = 134/140 (95%)
Frame = +1
Query: 70 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 249
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 250 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 430 IRKLADQCTGLQGFLIFHSF 489
IR+LAD CTGLQGFL+FHSF
Sbjct: 121 IRRLADNCTGLQGFLVFHSF 140
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 256 bits (626), Expect = 1e-68
Identities = 111/141 (78%), Positives = 129/141 (91%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD C+GLQGF +FHSF
Sbjct: 119 RIRRLADNCSGLQGFFVFHSF 139
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 256 bits (626), Expect = 1e-68
Identities = 111/141 (78%), Positives = 129/141 (91%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD C+GLQGF +FHSF
Sbjct: 119 RIRRLADNCSGLQGFFVFHSF 139
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 254 bits (623), Expect = 2e-68
Identities = 110/141 (78%), Positives = 129/141 (91%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD C+GLQGF +FHSF
Sbjct: 119 RIRRLADNCSGLQGFFVFHSF 139
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 254 bits (623), Expect = 2e-68
Identities = 109/141 (77%), Positives = 127/141 (90%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
R+R+L ++C LQGFLIFHSF
Sbjct: 121 RVRRLTERCQSLQGFLIFHSF 141
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 254 bits (623), Expect = 2e-68
Identities = 110/141 (78%), Positives = 129/141 (91%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD C+GLQGF +FHSF
Sbjct: 119 RIRRLADNCSGLQGFFVFHSF 139
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 253 bits (620), Expect = 5e-68
Identities = 108/142 (76%), Positives = 127/142 (89%)
Frame = +1
Query: 64 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 243
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 244 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 424 DRIRKLADQCTGLQGFLIFHSF 489
DR+R+L + C GLQGFL+FHSF
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSF 146
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 250 bits (611), Expect = 6e-67
Identities = 108/141 (76%), Positives = 127/141 (90%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD C+GLQGF +FHSF
Sbjct: 119 RIRRLADNCSGLQGFFVFHSF 139
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 250 bits (611), Expect = 6e-67
Identities = 108/141 (76%), Positives = 127/141 (90%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LAD C+GLQGF +FHSF
Sbjct: 119 RIRRLADNCSGLQGFFVFHSF 139
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 236 bits (578), Expect = 6e-63
Identities = 104/141 (73%), Positives = 119/141 (84%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 427 RIRKLADQCTGLQGFLIFHSF 489
RIR+LA+ C GLQGF +FHSF
Sbjct: 118 RIRRLANNCEGLQGFFVFHSF 138
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 234 bits (573), Expect = 3e-62
Identities = 102/140 (72%), Positives = 120/140 (85%)
Frame = +1
Query: 70 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 249
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 250 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 430 IRKLADQCTGLQGFLIFHSF 489
+++LA+ C GLQGF+IFHSF
Sbjct: 128 VKRLAENCNGLQGFVIFHSF 147
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 215 bits (526), Expect = 1e-56
Identities = 92/140 (65%), Positives = 112/140 (80%)
Frame = +1
Query: 70 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 249
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 250 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 430 IRKLADQCTGLQGFLIFHSF 489
IRK + C GLQGFL+FHSF
Sbjct: 125 IRKQTENCEGLQGFLVFHSF 144
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 190 bits (464), Expect = 4e-49
Identities = 82/119 (68%), Positives = 100/119 (84%)
Frame = +1
Query: 133 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 312
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 313 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSF 489
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFHSF
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSF 119
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 141 bits (342), Expect = 3e-34
Identities = 68/140 (48%), Positives = 89/140 (63%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
+RK A+ C LQGF + HS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHS 138
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 140 bits (340), Expect = 4e-34
Identities = 68/140 (48%), Positives = 90/140 (64%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
IRK A+ C LQGF + HS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHS 138
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 140 bits (339), Expect = 6e-34
Identities = 68/140 (48%), Positives = 90/140 (64%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
IRK A+ C LQGF + HS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHS 138
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 138 bits (334), Expect = 2e-33
Identities = 66/140 (47%), Positives = 89/140 (63%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
+RK A+ LQGF + HS
Sbjct: 119 VVRKEAESTDCLQGFQLTHS 138
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 138 bits (334), Expect = 2e-33
Identities = 66/140 (47%), Positives = 89/140 (63%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
+RK A+ LQGF + HS
Sbjct: 119 VVRKEAESTDCLQGFQLTHS 138
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 135 bits (327), Expect = 2e-32
Identities = 65/140 (46%), Positives = 85/140 (60%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
+RK A+ C LQGF + HS
Sbjct: 119 VVRKEAESCDCLQGFQMTHS 138
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 120 bits (290), Expect = 5e-28
Identities = 60/140 (42%), Positives = 84/140 (60%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
IR+ A+ L+GF + HS
Sbjct: 119 VIRREAEAADSLEGFQLIHS 138
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 120 bits (290), Expect = 5e-28
Identities = 60/140 (42%), Positives = 84/140 (60%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 247 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 426
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 427 RIRKLADQCTGLQGFLIFHS 486
IR+ A+ L+GF + HS
Sbjct: 119 VIRREAEAADSLEGFQLIHS 138
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 76.2 bits (179), Expect = 1e-14
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +1
Query: 79 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 258
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 259 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 429
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 430 IRKLADQCTGLQGFLIFHS 486
I + A+ L G L HS
Sbjct: 124 IIREAENTNNLDGILFTHS 142
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 76.2 bits (179), Expect = 1e-14
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +1
Query: 79 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 258
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 259 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 429
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 430 IRKLADQCTGLQGFLIFHS 486
I + A+ L G L HS
Sbjct: 124 IIREAENTNNLDGILFTHS 142
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.30
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 95 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 250
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 109 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 288
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 289 VDE 297
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 109 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 288
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 289 VDE 297
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 109 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 288
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 289 VDE 297
DE
Sbjct: 116 ADE 118
>Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical
protein B0393.7 protein.
Length = 267
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 526 KESEPQEPVPPTERSGRSGILADRYTGQRACGFCPKP 416
++ P P E G+ IL D GQ+ CG C +P
Sbjct: 56 RDCTPDCPNMSDEWCGQGTILCDAGVGQKRCGKCVRP 92
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 429
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z81136-6|CAB03461.3| 179|Caenorhabditis elegans Hypothetical
protein W02B8.1 protein.
Length = 179
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -1
Query: 333 WMKQLSVCASPDLINN---SRFKIDEDS-TGYVLASSGLAEESVERIVSTPDGLVCGHLA 166
WM + +CASP L N FK DED T + + +E++ R+ P + A
Sbjct: 28 WMIVILICASPHLFRNYLKKWFKHDEDPLTDKIRKAEARLQETL-RLAQKPSNFLVDQAA 86
Query: 165 I 163
+
Sbjct: 87 V 87
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 336 FWMKQLSVCASPDLINNSRFKIDEDSTGYV 247
F Q + CA+P +N +RF +D +S+ +V
Sbjct: 171 FRYTQPTKCANPQCMNRTRFSLDVNSSTFV 200
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 336 FWMKQLSVCASPDLINNSRFKIDEDSTGYV 247
F Q + CA+P +N +RF +D +S+ +V
Sbjct: 171 FRYTQPTKCANPQCMNRTRFSLDVNSSTFV 200
>AL032644-8|CAA21672.3| 179|Caenorhabditis elegans Hypothetical
protein W02B8.1 protein.
Length = 179
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -1
Query: 333 WMKQLSVCASPDLINN---SRFKIDEDS-TGYVLASSGLAEESVERIVSTPDGLVCGHLA 166
WM + +CASP L N FK DED T + + +E++ R+ P + A
Sbjct: 28 WMIVILICASPHLFRNYLKKWFKHDEDPLTDKIRKAEARLQETL-RLAQKPSNFLVDQAA 86
Query: 165 I 163
+
Sbjct: 87 V 87
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 336 FWMKQLSVCASPDLINNSRFKIDEDSTGYV 247
F Q + CA+P +N +RF +D +S+ +V
Sbjct: 171 FRYTQPTKCANPQCMNRTRFSLDVNSSTFV 200
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 357 FLTSNKLFWMKQLSVCASPDLINNSRFKIDED 262
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 502 VPPTERSGRSGILADRYTGQRACG 431
VP SGR GI A TG ACG
Sbjct: 621 VPNQVSSGRDGIKASIITGPNACG 644
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 217 TFFSETGAGKHVPRAVFVDLEPTVVD 294
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 217 TFFSETGAGKHVPRAVFVDLEPTVVD 294
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 217 TFFSETGAGKHVPRAVFVDLEPTVVD 294
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 502 VPPTERSGRSGILADRYTGQRACG 431
VP SGR GI A TG ACG
Sbjct: 621 VPNQVSSGRDGIKASIITGPNACG 644
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 502 VPPTERSGRSGILADRYTGQRACG 431
VP SGR GI A TG ACG
Sbjct: 621 VPNQVSSGRDGIKASIITGPNACG 644
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,609,819
Number of Sequences: 27780
Number of extensions: 304830
Number of successful extensions: 817
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -