Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2035
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   2.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   2.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   3.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   3.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   3.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.8  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    20   6.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   6.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   6.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 57  LTDDVKVVNYFYDSQKLNKLTM 122
           LTD   ++NY +  Q+L ++T+
Sbjct: 271 LTDTAHMINYAFCVQQLLRITV 292


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 57  LTDDVKVVNYFYDSQKLNKLTM 122
           LTD   ++NY +  Q+L ++T+
Sbjct: 271 LTDTAHMINYAFCVQQLLRITV 292


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 338 VLLDIIINSFRFHHGS 291
           V+LD+I   +  HHG+
Sbjct: 18  VVLDVIPPHYNIHHGA 33


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 81  NYFYDSQKLNKLTMCNYYHTVLHKLLTIRRF 173
           NYF    ++NK T+C  + T     + I +F
Sbjct: 347 NYF----EINKATLCGIFGTTTTYFIVILQF 373


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 81  NYFYDSQKLNKLTMCNYYHTVLHKLLTIRRF 173
           NYF    ++NK T+C  + T     + I +F
Sbjct: 347 NYF----EINKATLCGIFGTTTTYFIVILQF 373


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 138 YGNNCTLLIYL 106
           YGNNC + +Y+
Sbjct: 226 YGNNCEIDMYM 236


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
          oxygenase protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 15 FSDFRCFVR 41
          F DFRC++R
Sbjct: 60 FMDFRCYLR 68


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 15  FSDFRCFVR 41
           F DFRC++R
Sbjct: 120 FMDFRCYLR 128


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 15  FSDFRCFVR 41
           F DFRC++R
Sbjct: 120 FMDFRCYLR 128


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 134  VIIAHC*FI*FLGVVEIINYFYV 66
            ++  H  +I FLG++   + FY+
Sbjct: 990  IVWLHLVYISFLGIICAADVFYI 1012


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 134 VIIAHC*FI*FLGVVEIINYFYV 66
           ++  H  +I FLG++   + FY+
Sbjct: 271 IVWLHLVYISFLGIICAADVFYI 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,440
Number of Sequences: 336
Number of extensions: 1289
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)