Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2033
         (522 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing prot...   195   7e-50
BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing prot...   195   7e-50
AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing prot...   195   7e-50
AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmi...   195   7e-50
AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.          195   7e-50
AF313485-1|AAG29873.1|  307|Homo sapiens valosin-containing prot...   103   5e-22

>BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  195 bits (476), Expect = 7e-50
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +2

Query: 50  ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 229
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 230 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 409
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 410 EGLTGNLFQSILEP 451
           EG+TGNLF+  L+P
Sbjct: 124 EGITGNLFEVYLKP 137



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F+VYL P  LEAYRPI  G
Sbjct: 131 FEVYLKPYFLEAYRPIRKG 149


>BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  195 bits (476), Expect = 7e-50
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +2

Query: 50  ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 229
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 230 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 409
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 410 EGLTGNLFQSILEP 451
           EG+TGNLF+  L+P
Sbjct: 124 EGITGNLFEVYLKP 137



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F+VYL P  LEAYRPI  G
Sbjct: 131 FEVYLKPYFLEAYRPIRKG 149


>AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  195 bits (476), Expect = 7e-50
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +2

Query: 50  ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 229
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 230 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 409
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 410 EGLTGNLFQSILEP 451
           EG+TGNLF+  L+P
Sbjct: 124 EGITGNLFEVYLKP 137



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F+VYL P  LEAYRPI  G
Sbjct: 131 FEVYLKPYFLEAYRPIRKG 149


>AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmic
           reticulum ATPase protein.
          Length = 806

 Score =  195 bits (476), Expect = 7e-50
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +2

Query: 50  ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 229
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 230 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 409
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 410 EGLTGNLFQSILEP 451
           EG+TGNLF+  L+P
Sbjct: 124 EGITGNLFEVYLKP 137



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F+VYL P  LEAYRPI  G
Sbjct: 131 FEVYLKPYFLEAYRPIRKG 149


>AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.
          Length = 806

 Score =  195 bits (476), Expect = 7e-50
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +2

Query: 50  ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 229
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 230 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 409
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 410 EGLTGNLFQSILEP 451
           EG+TGNLF+  L+P
Sbjct: 124 EGITGNLFEVYLKP 137



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F+VYL P  LEAYRPI  G
Sbjct: 131 FEVYLKPYFLEAYRPIRKG 149


>AF313485-1|AAG29873.1|  307|Homo sapiens valosin-containing protein
           protein.
          Length = 307

 Score =  103 bits (246), Expect = 5e-22
 Identities = 45/73 (61%), Positives = 53/73 (72%)
 Frame = +2

Query: 233 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 412
           +E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3   REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62

Query: 413 GLTGNLFQSILEP 451
           G+TGNLF+  L+P
Sbjct: 63  GITGNLFEVYLKP 75



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F+VYL P  LEAYRPI  G
Sbjct: 69  FEVYLKPYFLEAYRPIRKG 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,422,896
Number of Sequences: 237096
Number of extensions: 1646165
Number of successful extensions: 3474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3474
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)