Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2033
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   169   8e-43
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   160   6e-40
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   160   6e-40
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    29   2.0  
Z66562-5|CAA91466.1|  250|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AB107358-1|BAD89379.1|  250|Caenorhabditis elegans troponin I 1 ...    28   4.7  
Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical p...    27   8.1  

>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  169 bits (412), Expect = 8e-43
 Identities = 76/131 (58%), Positives = 102/131 (77%)
 Frame = +2

Query: 59  KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 238
           K  D+LSTAIL+ K +PNRLIV+++  DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13  KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72

Query: 239 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 418
           +V I++SD++CP+EK+RM             DVVSI P P++ YG R+H+LPIDD++EGL
Sbjct: 73  SVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGL 132

Query: 419 TGNLFQSILEP 451
           TGNLF   L+P
Sbjct: 133 TGNLFDVFLKP 143



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 432 FKVYLNPTLLEAYRPIPSG 488
           F V+L P  LEAYRP+  G
Sbjct: 137 FDVFLKPYFLEAYRPLHKG 155


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  160 bits (388), Expect = 6e-40
 Identities = 76/131 (58%), Positives = 101/131 (77%)
 Frame = +2

Query: 59  KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 238
           K  D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13  KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72

Query: 239 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 418
           TV IVL+ DNCP++KI+M             DVVSI+    ++YGKRVH+LPIDD++EGL
Sbjct: 73  TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGL 131

Query: 419 TGNLFQSILEP 451
           TGNLF   L P
Sbjct: 132 TGNLFDVFLRP 142


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  160 bits (388), Expect = 6e-40
 Identities = 76/131 (58%), Positives = 101/131 (77%)
 Frame = +2

Query: 59  KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 238
           K  D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13  KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72

Query: 239 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 418
           TV IVL+ DNCP++KI+M             DVVSI+    ++YGKRVH+LPIDD++EGL
Sbjct: 73  TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGL 131

Query: 419 TGNLFQSILEP 451
           TGNLF   L P
Sbjct: 132 TGNLFDVFLRP 142


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
           protein C10C6.1 protein.
          Length = 1565

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +3

Query: 48  WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSKAN 227
           W    +  + R RSS+  +DP +S S   S  T+ S      K S    S  + S +  +
Sbjct: 56  WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115

Query: 228 AARKPFASCSQMIIALMR 281
            A +P    S   + L R
Sbjct: 116 PANRPSLHSSTSPVTLQR 133


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
           protein.
          Length = 1565

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +3

Query: 48  WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSKAN 227
           W    +  + R RSS+  +DP +S S   S  T+ S      K S    S  + S +  +
Sbjct: 56  WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115

Query: 228 AARKPFASCSQMIIALMR 281
            A +P    S   + L R
Sbjct: 116 PANRPSLHSSTSPVTLQR 133


>Z66562-5|CAA91466.1|  250|Caenorhabditis elegans Hypothetical
           protein F42E11.4 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 38  LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 187
           L K+  NK+ +DL T  LR++    +++ E  V+  N       AK+E +
Sbjct: 61  LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110


>AB107358-1|BAD89379.1|  250|Caenorhabditis elegans troponin I 1
           protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 38  LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 187
           L K+  NK+ +DL T  LR++    +++ E  V+  N       AK+E +
Sbjct: 61  LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110


>Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical
           protein ZK856.12 protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +2

Query: 128 EAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD---NCPD 277
           +++SDD    A +     + ++  G   + K K  K   CI+LS+D   N PD
Sbjct: 120 KSLSDDMERAAATFRNPHESEIVPGAMYIFKQKHGKAYRCIILSEDGDMNIPD 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,474,132
Number of Sequences: 27780
Number of extensions: 255186
Number of successful extensions: 651
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)