Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2031
         (323 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q679 Cluster: ENSANGP00000010726; n=1; Anopheles gamb...    46   2e-04
UniRef50_Q16Q13 Cluster: Putative uncharacterized protein; n=2; ...    44   7e-04
UniRef50_Q9VZJ2 Cluster: CG1136-PA; n=3; Endopterygota|Rep: CG11...    43   0.001
UniRef50_UPI00015B5B37 Cluster: PREDICTED: similar to conserved ...    42   0.002
UniRef50_Q01KJ0 Cluster: H0404F02.7 protein; n=4; Oryza sativa|R...    32   2.8  
UniRef50_Q5ILL0 Cluster: Ribosomal protein S3; n=1; Polysphondyl...    31   3.7  
UniRef50_Q4RGM9 Cluster: Chromosome 10 SCAF15095, whole genome s...    31   4.9  
UniRef50_Q8CC40 Cluster: Adult male diencephalon cDNA, RIKEN ful...    30   8.6  

>UniRef50_Q7Q679 Cluster: ENSANGP00000010726; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000010726 - Anopheles gambiae
           str. PEST
          Length = 439

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +2

Query: 242 DPDQFHIQTDDEDERYFLYQTHNGQYR 322
           D +Q+HIQTD+  ERYF YQT NGQ+R
Sbjct: 3   DSNQYHIQTDEGPERYFRYQTDNGQFR 29


>UniRef50_Q16Q13 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 447

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +2

Query: 242 DPDQFHIQTDDEDERYFLYQTHNGQYR 322
           + +Q+HIQTD+  ERYF YQT NGQ+R
Sbjct: 33  ESNQYHIQTDEGPERYFRYQTDNGQFR 59


>UniRef50_Q9VZJ2 Cluster: CG1136-PA; n=3; Endopterygota|Rep:
           CG1136-PA - Drosophila melanogaster (Fruit fly)
          Length = 458

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +2

Query: 191 VFACSSLAALDGYSPQQDPDQFHIQTDDEDERYFLYQTHNGQYR 322
           + A  +LAA+   S     +Q+HIQTD+  ERYF +QT +GQ+R
Sbjct: 5   LLALVALAAVVTGSQTPSANQYHIQTDEGPERYFRFQTDSGQFR 48


>UniRef50_UPI00015B5B37 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 368

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +2

Query: 251 QFHIQTDDEDERYFLYQTHNGQYR 322
           Q+HIQTD+  ERYF +QT NGQYR
Sbjct: 36  QYHIQTDEGPERYFRFQTLNGQYR 59


>UniRef50_Q01KJ0 Cluster: H0404F02.7 protein; n=4; Oryza sativa|Rep:
           H0404F02.7 protein - Oryza sativa (Rice)
          Length = 160

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = +1

Query: 172 TRTSSVGICLQFTSGVRRLQSPTRPRSVPHTNR*RGRALL 291
           T TSS+ +  Q  + +R L SP RP +V    R R RALL
Sbjct: 7   TTTSSLLLLHQPAAAIRSLPSPPRPSAVARPGRSRRRALL 46


>UniRef50_Q5ILL0 Cluster: Ribosomal protein S3; n=1; Polysphondylium
           pallidum|Rep: Ribosomal protein S3 - Polysphondylium
           pallidum (Cellular slime mold)
          Length = 389

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 26  YKRSVSSTF-YNFKNKSR*IKLKNNRSLFLDLN 121
           YK++  + F +NFKNK + IK+K  R +F   N
Sbjct: 330 YKKTKKNIFSFNFKNKKKDIKIKRKRRIFQTFN 362


>UniRef50_Q4RGM9 Cluster: Chromosome 10 SCAF15095, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
           SCAF15095, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 560

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 203 SSLAALDGYSPQQDP-DQFHIQTDDEDERYFLYQTHNGQYR 322
           S L  LD   PQQD  D +   T+ + ER  +YQTH G  R
Sbjct: 88  SDLEHLDLSQPQQDILDLYQTTTEPQRERGDMYQTHPGPQR 128


>UniRef50_Q8CC40 Cluster: Adult male diencephalon cDNA, RIKEN
           full-length enriched library, clone:9330132A10
           product:hypothetical protein, full insert sequence; n=1;
           Mus musculus|Rep: Adult male diencephalon cDNA, RIKEN
           full-length enriched library, clone:9330132A10
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 127

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -1

Query: 203 CRQ-IPTLEVLV*AFFITNLGIISRA*LCSSLKIKTYYFLILFTDFCF*SYRK*N*HSFC 27
           C Q IP + + +  + ++N  ++ +  + S+LK+K  +FL+LF   CF  +      SFC
Sbjct: 40  CEQLIPLMAINIFIYKLSNSALLPQ--IISNLKLKAMFFLLLFV--CFYHF------SFC 89

Query: 26  KQTKYIHT 3
             T Y+ T
Sbjct: 90  PLTTYMIT 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,120,649
Number of Sequences: 1657284
Number of extensions: 4868328
Number of successful extensions: 11916
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11914
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)