Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2031
         (323 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051628-1|AAK93052.1|  458|Drosophila melanogaster GH27759p pro...    43   8e-05
AE014296-746|AAF47829.1|  458|Drosophila melanogaster CG1136-PA ...    43   8e-05
BT004899-1|AAO47877.1|  557|Drosophila melanogaster LD10242p pro...    27   5.6  
BT001297-1|AAN71052.1|  457|Drosophila melanogaster AT11570p pro...    27   5.6  
AE013599-2941|AAM68425.1|  435|Drosophila melanogaster CG11025-P...    27   5.6  
AE013599-2940|AAF57527.2|  557|Drosophila melanogaster CG11025-P...    27   5.6  
AB018047-1|BAA84921.1|  412|Drosophila melanogaster protein ( Dr...    27   5.6  
BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p pro...    26   9.7  
AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-P...    26   9.7  

>AY051628-1|AAK93052.1|  458|Drosophila melanogaster GH27759p
           protein.
          Length = 458

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +2

Query: 191 VFACSSLAALDGYSPQQDPDQFHIQTDDEDERYFLYQTHNGQYR 322
           + A  +LAA+   S     +Q+HIQTD+  ERYF +QT +GQ+R
Sbjct: 5   LLALVALAAVVTGSQTPSANQYHIQTDEGPERYFRFQTDSGQFR 48


>AE014296-746|AAF47829.1|  458|Drosophila melanogaster CG1136-PA
           protein.
          Length = 458

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +2

Query: 191 VFACSSLAALDGYSPQQDPDQFHIQTDDEDERYFLYQTHNGQYR 322
           + A  +LAA+   S     +Q+HIQTD+  ERYF +QT +GQ+R
Sbjct: 5   LLALVALAAVVTGSQTPSANQYHIQTDEGPERYFRFQTDSGQFR 48


>BT004899-1|AAO47877.1|  557|Drosophila melanogaster LD10242p
           protein.
          Length = 557

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 263 VCGTDRGLVGDCSRLTPLVNCRQIPTLEV 177
           V G +  LV   +R  P VNC Q+PT+++
Sbjct: 260 VPGPNEQLVESATRYVP-VNCNQLPTIDI 287


>BT001297-1|AAN71052.1|  457|Drosophila melanogaster AT11570p
           protein.
          Length = 457

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 263 VCGTDRGLVGDCSRLTPLVNCRQIPTLEV 177
           V G +  LV   +R  P VNC Q+PT+++
Sbjct: 160 VPGPNEQLVESATRYVP-VNCNQLPTIDI 187


>AE013599-2941|AAM68425.1|  435|Drosophila melanogaster CG11025-PB,
           isoform B protein.
          Length = 435

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 263 VCGTDRGLVGDCSRLTPLVNCRQIPTLEV 177
           V G +  LV   +R  P VNC Q+PT+++
Sbjct: 138 VPGPNEQLVESATRYVP-VNCNQLPTIDI 165


>AE013599-2940|AAF57527.2|  557|Drosophila melanogaster CG11025-PA,
           isoform A protein.
          Length = 557

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 263 VCGTDRGLVGDCSRLTPLVNCRQIPTLEV 177
           V G +  LV   +R  P VNC Q+PT+++
Sbjct: 260 VPGPNEQLVESATRYVP-VNCNQLPTIDI 287


>AB018047-1|BAA84921.1|  412|Drosophila melanogaster protein (
           Drosophila melanogastermRNA, partial cds, similar to
           human isopeptidase T-3.).
          Length = 412

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 263 VCGTDRGLVGDCSRLTPLVNCRQIPTLEV 177
           V G +  LV   +R  P VNC Q+PT+++
Sbjct: 172 VPGPNEQLVESATRYVP-VNCNQLPTIDI 199


>BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p
           protein.
          Length = 1108

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +3

Query: 222 TATVPNKTPISSTYKQMTRTSATSCTKLTMDSIV 323
           T T P+ T +SST ++ + ++A+  T+L   +++
Sbjct: 195 TDTTPSSTSVSSTTEEPSSSTASPTTELPTSTVI 228


>AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-PA
           protein.
          Length = 1371

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +3

Query: 222 TATVPNKTPISSTYKQMTRTSATSCTKLTMDSIV 323
           T T P+ T +SST ++ + ++A+  T+L   +++
Sbjct: 458 TDTTPSSTSVSSTTEEPSSSTASPTTELPTSTVI 491


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,056,009
Number of Sequences: 53049
Number of extensions: 232771
Number of successful extensions: 722
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)